RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 GMCL1Q96IK5 515 aa19.86■□□□□ 0.77
NEK9-204ENST00000554258 PLVAPQ9BX97 442 aa19.86■□□□□ 0.77
NEK9-204ENST00000554258 MYH7BA7E2Y1 1941 aa19.86■□□□□ 0.77
NEK9-204ENST00000554258 FASNP49327 2511 aaKnown RBP19.85■□□□□ 0.77
NEK9-204ENST00000554258 PLA2G6O60733 806 aa19.85■□□□□ 0.77
NEK9-204ENST00000554258 SP100P23497 879 aaPredicted RBP19.85■□□□□ 0.77
NEK9-204ENST00000554258 EDNRBP24530 442 aa19.85■□□□□ 0.77
NEK9-204ENST00000554258 CLCN5P51795 746 aa19.85■□□□□ 0.77
NEK9-204ENST00000554258 ARHGAP1Q07960 439 aa19.85■□□□□ 0.77
NEK9-204ENST00000554258 COL9A2Q14055 689 aaPredicted RBP19.85■□□□□ 0.77
NEK9-204ENST00000554258 KCTD1Q719H9 257 aa19.85■□□□□ 0.77
NEK9-204ENST00000554258 CHD1LQ86WJ1 897 aa19.85■□□□□ 0.77
NEK9-204ENST00000554258 HINFPQ9BQA5 517 aa19.85■□□□□ 0.77
NEK9-204ENST00000554258 SORCS3Q9UPU3 1222 aa19.85■□□□□ 0.77
NEK9-204ENST00000554258 KIAA1217Q5T5P2 1943 aa19.84■□□□□ 0.77
NEK9-204ENST00000554258 SALL3Q9BXA9 1300 aa19.84■□□□□ 0.77
NEK9-204ENST00000554258 KIAA1671Q9BY89 1806 aa19.84■□□□□ 0.77
NEK9-204ENST00000554258 MINDY4BA8MYZ0 360 aa19.84■□□□□ 0.77
NEK9-204ENST00000554258 BRD1O95696 1058 aa19.84■□□□□ 0.77
NEK9-204ENST00000554258 DNAJB1P25685 340 aa19.84■□□□□ 0.77
NEK9-204ENST00000554258 CCDC62Q6P9F0 684 aa19.84■□□□□ 0.77
NEK9-204ENST00000554258 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.84■□□□□ 0.77
NEK9-204ENST00000554258 B4DLN1 442 aa19.83■□□□□ 0.77
NEK9-204ENST00000554258 PRDM1O75626 825 aa19.83■□□□□ 0.77
NEK9-204ENST00000554258 ZNF286BP0CG31 522 aa19.83■□□□□ 0.77
NEK9-204ENST00000554258 MRPL12P52815 198 aaKnown RBP19.83■□□□□ 0.77
NEK9-204ENST00000554258 BTG3Q14201 252 aaPredicted RBP19.83■□□□□ 0.77
NEK9-204ENST00000554258 LY6KQ17RY6 165 aa19.83■□□□□ 0.77
NEK9-204ENST00000554258 SBK1Q52WX2 424 aa19.83■□□□□ 0.77
NEK9-204ENST00000554258 RNF207Q6ZRF8 634 aa19.83■□□□□ 0.77
NEK9-204ENST00000554258 SERINC5Q86VE9 423 aa19.83■□□□□ 0.77
NEK9-204ENST00000554258 SEMA4AQ9H3S1 761 aa19.83■□□□□ 0.77
NEK9-204ENST00000554258 ZNF287Q9HBT7 754 aa19.83■□□□□ 0.77
NEK9-204ENST00000554258 F2P00734 622 aa19.82■□□□□ 0.76
NEK9-204ENST00000554258 ANGPT1Q15389 498 aa19.82■□□□□ 0.76
NEK9-204ENST00000554258 DNERQ8NFT8 737 aa19.82■□□□□ 0.76
NEK9-204ENST00000554258 APBB2Q92870 758 aa19.82■□□□□ 0.76
NEK9-204ENST00000554258 P2RX5Q93086 422 aa19.82■□□□□ 0.76
NEK9-204ENST00000554258 TLE6Q9H808 572 aa19.82■□□□□ 0.76
NEK9-204ENST00000554258 HAS3O00219 553 aa19.81■□□□□ 0.76
NEK9-204ENST00000554258 ITGB1P05556 798 aa19.81■□□□□ 0.76
NEK9-204ENST00000554258 CTSHP09668 335 aa19.81■□□□□ 0.76
NEK9-204ENST00000554258 IFIT2P09913 472 aaKnown RBP19.81■□□□□ 0.76
NEK9-204ENST00000554258 HIC1Q14526 733 aa19.81■□□□□ 0.76
NEK9-204ENST00000554258 RCSD1Q6JBY9 416 aa19.81■□□□□ 0.76
NEK9-204ENST00000554258 HAUS7Q99871 368 aa19.81■□□□□ 0.76
NEK9-204ENST00000554258 OSBPL7Q9BZF2 842 aa19.81■□□□□ 0.76
NEK9-204ENST00000554258 LNPKQ9C0E8 428 aa19.81■□□□□ 0.76
NEK9-204ENST00000554258 TSHZ2Q9NRE2 1034 aa19.81■□□□□ 0.76
NEK9-204ENST00000554258 TTC3P53804 2025 aa19.8■□□□□ 0.76
NEK9-204ENST00000554258 CHGBP05060 677 aa19.8■□□□□ 0.76
NEK9-204ENST00000554258 RSPO4Q2I0M5 234 aaPredicted RBP19.8■□□□□ 0.76
NEK9-204ENST00000554258 SEPT14Q6ZU15 432 aa19.8■□□□□ 0.76
NEK9-204ENST00000554258 FLCNQ8NFG4 579 aa19.8■□□□□ 0.76
NEK9-204ENST00000554258 SPPL3Q8TCT6 385 aa19.8■□□□□ 0.76
NEK9-204ENST00000554258 NEK1Q96PY6 1258 aa19.8■□□□□ 0.76
NEK9-204ENST00000554258 RC3H2Q9HBD1 1191 aaKnown RBP19.8■□□□□ 0.76
NEK9-204ENST00000554258 PAG1Q9NWQ8 432 aa19.8■□□□□ 0.76
NEK9-204ENST00000554258 GTF3C3Q9Y5Q9 886 aa19.8■□□□□ 0.76
NEK9-204ENST00000554258 PLXNA4Q9HCM2 1894 aa19.79■□□□□ 0.76
NEK9-204ENST00000554258 TSPY3P0CV98 308 aa19.79■□□□□ 0.76
NEK9-204ENST00000554258 TSPY8P0CW00 308 aa19.79■□□□□ 0.76
NEK9-204ENST00000554258 RPS6P62753 249 aaKnown RBP19.79■□□□□ 0.76
NEK9-204ENST00000554258 RBM10P98175 930 aaKnown RBP19.79■□□□□ 0.76
NEK9-204ENST00000554258 UBE3CQ15386 1083 aa19.79■□□□□ 0.76
NEK9-204ENST00000554258 NAALADL2Q58DX5 795 aa19.79■□□□□ 0.76
NEK9-204ENST00000554258 CYP2W1Q8TAV3 490 aa19.79■□□□□ 0.76
NEK9-204ENST00000554258 OTUD7AQ8TE49 926 aaPredicted RBP19.79■□□□□ 0.76
NEK9-204ENST00000554258 POF1BQ8WVV4 589 aa19.79■□□□□ 0.76
NEK9-204ENST00000554258 RANBP17Q9H2T7 1088 aaKnown RBP19.79■□□□□ 0.76
NEK9-204ENST00000554258 SMOC2Q9H3U7 446 aa19.79■□□□□ 0.76
NEK9-204ENST00000554258 ZBTB47Q9UFB7 747 aaPredicted RBP19.79■□□□□ 0.76
NEK9-204ENST00000554258 NR2E1Q9Y466 385 aa19.79■□□□□ 0.76
NEK9-204ENST00000554258 PDE4AP27815 886 aa19.78■□□□□ 0.76
NEK9-204ENST00000554258 CCDC105Q8IYK2 499 aa19.78■□□□□ 0.76
NEK9-204ENST00000554258 NEDD1Q8NHV4 660 aa19.78■□□□□ 0.76
NEK9-204ENST00000554258 CLEC4DQ8WXI8 215 aa19.78■□□□□ 0.76
NEK9-204ENST00000554258 ATP6V0A1Q93050 837 aa19.78■□□□□ 0.76
NEK9-204ENST00000554258 PLIN4Q96Q06 1357 aa19.78■□□□□ 0.76
NEK9-204ENST00000554258 PER2O15055 1255 aa19.77■□□□□ 0.76
NEK9-204ENST00000554258 ATP5JP18859 108 aa19.77■□□□□ 0.76
NEK9-204ENST00000554258 RASGRP2Q7LDG7 609 aa19.77■□□□□ 0.76
NEK9-204ENST00000554258 KLHL23Q8NBE8 558 aa19.77■□□□□ 0.76
NEK9-204ENST00000554258 ATP8B4Q8TF62 1192 aa19.77■□□□□ 0.76
NEK9-204ENST00000554258 PUS7LQ9H0K6 701 aaKnown RBP19.77■□□□□ 0.76
NEK9-204ENST00000554258 RALYQ9UKM9 306 aaKnown RBP19.77■□□□□ 0.76
NEK9-204ENST00000554258 MTMR7Q9Y216 660 aa19.77■□□□□ 0.76
NEK9-204ENST00000554258 TTC41PQ6P2S7 1318 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 FSD2A1L4K1 749 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 SRGAP2BP0DMP2 458 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 CWF19L1Q69YN2 538 aaKnown RBP19.76■□□□□ 0.75
NEK9-204ENST00000554258 PLEKHM2Q8IWE5 1019 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 VN1R2Q8NFZ6 395 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 PPTC7Q8NI37 304 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 MICAL1Q8TDZ2 1067 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 RUBCNQ92622 972 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 ZNF689Q96CS4 500 aaPredicted RBP19.76■□□□□ 0.75
NEK9-204ENST00000554258 OSBPL3Q9H4L5 887 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 ECHDC1Q9NTX5 307 aa19.76■□□□□ 0.75
NEK9-204ENST00000554258 MRPL42Q9Y6G3 142 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms