RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 SAFBQ15424 915 aaKnown RBP eCLIP10.62□□□□□ -0.71
CHD8-206ENST00000553870 HSDL1Q3SXM5 330 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 PRPF38BQ5VTL8 546 aaKnown RBP10.62□□□□□ -0.71
CHD8-206ENST00000553870 CYFIP1Q7L576 1253 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 PLA2G4DQ86XP0 818 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 FAM184AQ8NB25 1140 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 CYP2W1Q8TAV3 490 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 RASGRP4Q8TDF6 673 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 TBCKQ8TEA7 893 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 PGBD1Q96JS3 809 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 SDF4Q9BRK5 362 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 AGO4Q9HCK5 861 aaKnown RBP10.62□□□□□ -0.71
CHD8-206ENST00000553870 TBC1D22BQ9NU19 505 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 PRKAG2Q9UGJ0 569 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 KCNJ14Q9UNX9 436 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 ATP11BQ9Y2G3 1177 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.62□□□□□ -0.71
CHD8-206ENST00000553870 PDE4DIPQ5VU43 2346 aa10.62□□□□□ -0.71
CHD8-206ENST00000553870 IGLV3-22A0A075B6J6 115 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 FAM86B1E9PN63 330 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 ADAMTS3O15072 1205 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 MMP1P03956 469 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 FAM86B2P0C5J1 330 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 SUPT20HL2P0C7V6 817 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 GCFC2P16383 781 aaKnown RBP10.61□□□□□ -0.71
CHD8-206ENST00000553870 PTGS1P23219 599 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 TLE2Q04725 743 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 TRIM60Q495X7 471 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 Q4G0T1 1027 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 KRT40Q6A162 431 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 PPP4R3AQ6IN85 833 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 SESTD1Q86VW0 696 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 FBXO18Q8NFZ0 1043 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 SEPT1Q8WYJ6 367 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 TNPO1Q92973 898 aaKnown RBP10.61□□□□□ -0.71
CHD8-206ENST00000553870 C8orf76Q96K31 380 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 MBOAT7Q96N66 472 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 GPR20Q99678 358 aa10.61□□□□□ -0.71
CHD8-206ENST00000553870 JPH1Q9HDC5 661 aaPredicted RBP10.61□□□□□ -0.71
CHD8-206ENST00000553870 GRIN2DO15399 1336 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 H0YGN5 161 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 HAS3O00219 553 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 IPO5O00410 1097 aaKnown RBP10.6□□□□□ -0.71
CHD8-206ENST00000553870 KIAA0355O15063 1070 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 EDIL3O43854 480 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 ATG7O95352 703 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 F2P00734 622 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 CLTBP09497 229 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 ARP10275 920 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 FAAP100Q0VG06 881 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 NBPF20Q3BBV1 942 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 PRR16Q569H4 304 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 NEK8Q86SG6 692 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 C7orf61Q8IZ16 206 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 KAT2BQ92831 832 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 SNX21Q969T3 373 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 RIT2Q99578 217 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 ZNF577Q9BSK1 485 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 C16orf70Q9BSU1 422 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 FOXP1Q9H334 677 aaPredicted RBP10.6□□□□□ -0.71
CHD8-206ENST00000553870 SLC9A2Q9UBY0 812 aa10.6□□□□□ -0.71
CHD8-206ENST00000553870 MKI67P46013 3256 aaKnown RBP10.6□□□□□ -0.71
CHD8-206ENST00000553870 BTBD18B2RXH4 712 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 H3BRB1 525 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 DHX15O43143 795 aaKnown RBP10.59□□□□□ -0.71
CHD8-206ENST00000553870 PQBP1O60828 265 aaKnown RBP10.59□□□□□ -0.71
CHD8-206ENST00000553870 CD2BP2O95400 341 aaKnown RBP10.59□□□□□ -0.71
CHD8-206ENST00000553870 CD4P01730 458 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 LGALS2P05162 132 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 PSEN2P49810 448 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 PSMC6P62333 389 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 CUL4AQ13619 759 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 MFSD10Q14728 455 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 INF2Q27J81 1249 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 FAM126BQ8IXS8 530 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 SMAP1Q8IYB5 467 aaPredicted RBP10.59□□□□□ -0.71
CHD8-206ENST00000553870 DIS3L2Q8IYB7 885 aaKnown RBP10.59□□□□□ -0.71
CHD8-206ENST00000553870 OXER1Q8TDS5 423 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 TNFRSF25Q93038 417 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 LENG9Q96B70 501 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 FAM20AQ96MK3 541 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 SMARCAD1Q9H4L7 1026 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 TUT1Q9H6E5 874 aaKnown RBP10.59□□□□□ -0.71
CHD8-206ENST00000553870 BCAS3Q9H6U6 928 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 GJB4Q9NTQ9 266 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 TMEM39AQ9NV64 488 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 TCEAL9Q9UHQ7 104 aa10.59□□□□□ -0.71
CHD8-206ENST00000553870 ZNF215Q9UL58 517 aaPredicted RBP10.59□□□□□ -0.71
CHD8-206ENST00000553870 MYH7BA7E2Y1 1941 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 GSTTP1A0A1W2PQM5 241 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 TBX3O15119 743 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 LGR5O75473 907 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 GNAT1P11488 350 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 BMP8BP34820 402 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 TCF7P36402 384 aaPredicted RBP10.58□□□□□ -0.72
CHD8-206ENST00000553870 SLC26A2P50443 739 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 ACTR2P61160 394 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 KRT76Q01546 638 aa10.58□□□□□ -0.72
CHD8-206ENST00000553870 ITGB3BPQ13352 177 aaPredicted RBP10.58□□□□□ -0.72
CHD8-206ENST00000553870 KIAA0753Q2KHM9 967 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms