RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 PCDHA6Q9UN73 950 aa20.31■□□□□ 0.84
FOXN3-204ENST00000553840 PCDHA8Q9Y5H6 950 aa20.31■□□□□ 0.84
FOXN3-204ENST00000553840 SNX14Q9Y5W7 946 aa20.31■□□□□ 0.84
FOXN3-204ENST00000553840 V9GY48 417 aaPredicted RBP20.31■□□□□ 0.84
FOXN3-204ENST00000553840 EPB41L2O43491 1005 aaKnown RBP20.3■□□□□ 0.84
FOXN3-204ENST00000553840 FOSP01100 380 aaPredicted RBP20.3■□□□□ 0.84
FOXN3-204ENST00000553840 LGALS2P05162 132 aa20.3■□□□□ 0.84
FOXN3-204ENST00000553840 ATP2A2P16615 1042 aaKnown RBP20.3■□□□□ 0.84
FOXN3-204ENST00000553840 METAP2P50579 478 aaKnown RBP eCLIP20.3■□□□□ 0.84
FOXN3-204ENST00000553840 WWC2Q6AWC2 1192 aa20.3■□□□□ 0.84
FOXN3-204ENST00000553840 LRRC8DQ7L1W4 858 aa20.3■□□□□ 0.84
FOXN3-204ENST00000553840 SLC28A3Q9HAS3 691 aa20.3■□□□□ 0.84
FOXN3-204ENST00000553840 RIC8AQ9NPQ8 531 aa20.3■□□□□ 0.84
FOXN3-204ENST00000553840 KAT6AQ92794 2004 aa20.3■□□□□ 0.84
FOXN3-204ENST00000553840 C17orf102A2RUQ5 167 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 CKBP12277 381 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 ADCY7P51828 1080 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 RBL2Q08999 1139 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 SEMA3FQ13275 785 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 MTMR1Q13613 665 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 GRIN2CQ14957 1233 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 BRF1Q92994 677 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 CTAGE1Q96RT6 745 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 SLC9A7Q96T83 725 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 GPR20Q99678 358 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 BCAS3Q9H6U6 928 aa20.29■□□□□ 0.84
FOXN3-204ENST00000553840 SMCO2A6NFE2 343 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 BAIAP3O94812 1187 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 GNAT1P11488 350 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 CPA1P15085 419 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 APOBRQ0VD83 1088 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 FUT2Q10981 343 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 MAFAQ8NHW3 353 aaPredicted RBP20.28■□□□□ 0.84
FOXN3-204ENST00000553840 PHOSPHO2Q8TCD6 241 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 ATP6V0A1Q93050 837 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 VWCEQ96DN2 955 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 GAS2L1Q99501 681 aaPredicted RBP20.28■□□□□ 0.84
FOXN3-204ENST00000553840 BARHL2Q9NY43 387 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 PCDHA11Q9Y5I1 949 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 COL6A3P12111 3177 aa20.28■□□□□ 0.84
FOXN3-204ENST00000553840 RPS6KB1P23443 525 aa20.27■□□□□ 0.84
FOXN3-204ENST00000553840 CDC27P30260 824 aa20.27■□□□□ 0.84
FOXN3-204ENST00000553840 KCNJ6P48051 423 aa20.27■□□□□ 0.84
FOXN3-204ENST00000553840 SP4Q02446 784 aa20.27■□□□□ 0.84
FOXN3-204ENST00000553840 UTP14CQ5TAP6 766 aaKnown RBP20.27■□□□□ 0.84
FOXN3-204ENST00000553840 FBXL16Q8N461 479 aa20.27■□□□□ 0.84
FOXN3-204ENST00000553840 CCDC12Q8WUD4 166 aaPredicted RBP20.27■□□□□ 0.84
FOXN3-204ENST00000553840 DHX38Q92620 1227 aaKnown RBP20.27■□□□□ 0.84
FOXN3-204ENST00000553840 NKX2-4Q9H2Z4 354 aa20.27■□□□□ 0.84
FOXN3-204ENST00000553840 JADE2Q9NQC1 790 aa20.27■□□□□ 0.84
FOXN3-204ENST00000553840 UBIAD1Q9Y5Z9 338 aa20.27■□□□□ 0.84
FOXN3-204ENST00000553840 KIF28PB7ZC32 967 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 STXBP3O00186 592 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 SMIM10L2AP0DMW4 78 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 SMIM10L2BP0DMW5 78 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 ITGB5P18084 799 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 ADD1P35611 737 aaKnown RBP20.26■□□□□ 0.83
FOXN3-204ENST00000553840 AKAP17AQ02040 695 aaKnown RBP20.26■□□□□ 0.83
FOXN3-204ENST00000553840 AP3B2Q13367 1082 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 ERICH6BQ5W0A0 696 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 SERINC5Q86VE9 423 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 RNPEPQ9H4A4 650 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 FAM217BQ9NTX9 383 aaPredicted RBP20.26■□□□□ 0.83
FOXN3-204ENST00000553840 PPP4R2Q9NY27 417 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 TET1Q8NFU7 2136 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 EMSYQ7Z589 1322 aa20.26■□□□□ 0.83
FOXN3-204ENST00000553840 ATP9AO75110 1047 aa20.25■□□□□ 0.83
FOXN3-204ENST00000553840 KCNA2P16389 499 aa20.25■□□□□ 0.83
FOXN3-204ENST00000553840 TCF7P36402 384 aaPredicted RBP20.25■□□□□ 0.83
FOXN3-204ENST00000553840 RABGGTBP53611 331 aa20.25■□□□□ 0.83
FOXN3-204ENST00000553840 ZNF200P98182 395 aaPredicted RBP20.25■□□□□ 0.83
FOXN3-204ENST00000553840 PFKFB3Q16875 520 aaPredicted RBP20.25■□□□□ 0.83
FOXN3-204ENST00000553840 ZNF618Q5T7W0 954 aa20.25■□□□□ 0.83
FOXN3-204ENST00000553840 PPP2R2DQ66LE6 453 aa20.25■□□□□ 0.83
FOXN3-204ENST00000553840 MCTP2Q6DN12 878 aa20.25■□□□□ 0.83
FOXN3-204ENST00000553840 CNKSR3Q6P9H4 555 aa20.25■□□□□ 0.83
FOXN3-204ENST00000553840 SEPT1Q8WYJ6 367 aa20.25■□□□□ 0.83
FOXN3-204ENST00000553840 MXRA8Q9BRK3 442 aa20.25■□□□□ 0.83
FOXN3-204ENST00000553840 ANO3Q9BYT9 981 aa20.25■□□□□ 0.83
FOXN3-204ENST00000553840 YBX2Q9Y2T7 364 aaKnown RBP20.25■□□□□ 0.83
FOXN3-204ENST00000553840 EFCAB14O75071 495 aa20.24■□□□□ 0.83
FOXN3-204ENST00000553840 SCG2P13521 617 aa20.24■□□□□ 0.83
FOXN3-204ENST00000553840 THPOP40225 353 aa20.24■□□□□ 0.83
FOXN3-204ENST00000553840 TYW1BQ6NUM6 668 aa20.24■□□□□ 0.83
FOXN3-204ENST00000553840 AGXT2Q9BYV1 514 aa20.24■□□□□ 0.83
FOXN3-204ENST00000553840 C6orf50Q9HD87 102 aa20.24■□□□□ 0.83
FOXN3-204ENST00000553840 PKD2L1Q9P0L9 805 aa20.24■□□□□ 0.83
FOXN3-204ENST00000553840 NID2Q14112 1375 aa20.23■□□□□ 0.83
FOXN3-204ENST00000553840 ABHD14A-ACY1A0A1B0GW23 586 aa20.23■□□□□ 0.83
FOXN3-204ENST00000553840 RSPH10B2B2RC85 870 aa20.23■□□□□ 0.83
FOXN3-204ENST00000553840 PRPF3O43395 683 aaKnown RBP20.23■□□□□ 0.83
FOXN3-204ENST00000553840 CAND2O75155 1236 aa20.23■□□□□ 0.83
FOXN3-204ENST00000553840 CXCL10P02778 98 aa20.23■□□□□ 0.83
FOXN3-204ENST00000553840 RSPH10BP0C881 870 aa20.23■□□□□ 0.83
FOXN3-204ENST00000553840 HOXC8P31273 242 aa20.23■□□□□ 0.83
FOXN3-204ENST00000553840 ZNF76P36508 570 aa20.23■□□□□ 0.83
FOXN3-204ENST00000553840 IKBKEQ14164 716 aa20.23■□□□□ 0.83
FOXN3-204ENST00000553840 TRIM71Q2Q1W2 868 aaKnown RBP20.23■□□□□ 0.83
FOXN3-204ENST00000553840 RUFY3Q7L099 469 aa20.23■□□□□ 0.83
FOXN3-204ENST00000553840 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms