RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 CCDC148Q8NFR7 591 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 CDHR1Q96JP9 859 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 ALG1Q9BT22 464 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 C6orf50Q9HD87 102 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 JADE2Q9NQC1 790 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 PKD2L1Q9P0L9 805 aa16.26■□□□□ 0.19
PRKCH-207ENST00000553831 LAMA2P24043 3122 aaKnown RBP16.25■□□□□ 0.19
PRKCH-207ENST00000553831 HAS3O00219 553 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 PFKFB2O60825 505 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 DEXIO95424 95 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 LGALS2P05162 132 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 CSF2RAP15509 400 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 SP4Q02446 784 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 PPIGQ13427 754 aaKnown RBP eCLIP16.25■□□□□ 0.19
PRKCH-207ENST00000553831 ANKRD1Q15327 319 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 GDF6Q6KF10 455 aaPredicted RBP16.25■□□□□ 0.19
PRKCH-207ENST00000553831 CPLX2Q6PUV4 134 aaKnown RBP16.25■□□□□ 0.19
PRKCH-207ENST00000553831 REXO1Q8N1G1 1221 aaKnown RBP16.25■□□□□ 0.19
PRKCH-207ENST00000553831 CYP2W1Q8TAV3 490 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 RASGRP4Q8TDF6 673 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 GPR20Q99678 358 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 MXRA8Q9BRK3 442 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 C16orf70Q9BSU1 422 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 WNT8AQ9H1J5 351 aa16.25■□□□□ 0.19
PRKCH-207ENST00000553831 SLKQ9H2G2 1235 aaPredicted RBP16.25■□□□□ 0.19
PRKCH-207ENST00000553831 GNA11P29992 359 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 CCL23P55773 120 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 ARHGAP4P98171 946 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 PTGISQ16647 500 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 CEP55Q53EZ4 464 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 TMEM199Q8N511 208 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 C7orf31Q8N865 590 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 GIMAP8Q8ND71 665 aaPredicted RBP16.24■□□□□ 0.19
PRKCH-207ENST00000553831 CTAGE1Q96RT6 745 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 HDAC6Q9UBN7 1215 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 GTF2IRD1Q9UHL9 959 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 NOD1Q9Y239 953 aa16.24■□□□□ 0.19
PRKCH-207ENST00000553831 MAFGO15525 162 aa16.23■□□□□ 0.19
PRKCH-207ENST00000553831 LARGE1O95461 756 aa16.23■□□□□ 0.19
PRKCH-207ENST00000553831 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
PRKCH-207ENST00000553831 BICD2Q8TD16 824 aa16.23■□□□□ 0.19
PRKCH-207ENST00000553831 SCLYQ96I15 445 aa16.23■□□□□ 0.19
PRKCH-207ENST00000553831 RNPC3Q96LT9 517 aaKnown RBP16.23■□□□□ 0.19
PRKCH-207ENST00000553831 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
PRKCH-207ENST00000553831 SH3GLB2Q9NR46 395 aa16.23■□□□□ 0.19
PRKCH-207ENST00000553831 KCNH7Q9NS40 1196 aa16.23■□□□□ 0.19
PRKCH-207ENST00000553831 H3BRB1 525 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 DTNBO60941 627 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 CDKL5O76039 1030 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 ARP10275 920 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 ACRP10323 421 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 ZNF76P36508 570 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 NEK4P51957 841 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 NLRP5P59047 1200 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 UTP14CQ5TAP6 766 aaKnown RBP16.22■□□□□ 0.19
PRKCH-207ENST00000553831 MCTP2Q6DN12 878 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 C16orf59Q7L2K0 433 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 CRYGNQ8WXF5 182 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.22■□□□□ 0.19
PRKCH-207ENST00000553831 TUT1Q9H6E5 874 aaKnown RBP16.22■□□□□ 0.19
PRKCH-207ENST00000553831 IL23AQ9NPF7 189 aa16.22■□□□□ 0.19
PRKCH-207ENST00000553831 STK36Q9NRP7 1315 aa16.21■□□□□ 0.19
PRKCH-207ENST00000553831 FAM86B1E9PN63 330 aa16.21■□□□□ 0.19
PRKCH-207ENST00000553831 MEIS1O00470 390 aa16.21■□□□□ 0.19
PRKCH-207ENST00000553831 CYP3A4P08684 503 aa16.21■□□□□ 0.19
PRKCH-207ENST00000553831 FAM86B2P0C5J1 330 aa16.21■□□□□ 0.19
PRKCH-207ENST00000553831 TCF7P36402 384 aaPredicted RBP16.21■□□□□ 0.19
PRKCH-207ENST00000553831 ITGB3BPQ13352 177 aaPredicted RBP16.21■□□□□ 0.19
PRKCH-207ENST00000553831 HIC1Q14526 733 aa16.21■□□□□ 0.19
PRKCH-207ENST00000553831 ME3Q16798 604 aa16.21■□□□□ 0.19
PRKCH-207ENST00000553831 TMEM240Q5SV17 173 aa16.21■□□□□ 0.19
PRKCH-207ENST00000553831 PSRC1Q6PGN9 363 aaPredicted RBP16.21■□□□□ 0.19
PRKCH-207ENST00000553831 NECAB1Q8N987 351 aa16.21■□□□□ 0.19
PRKCH-207ENST00000553831 DHX38Q92620 1227 aaKnown RBP16.21■□□□□ 0.19
PRKCH-207ENST00000553831 AGO4Q9HCK5 861 aaKnown RBP16.21■□□□□ 0.19
PRKCH-207ENST00000553831 NFASCO94856 1347 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 IGLV3-22A0A075B6J6 115 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 CTDNEP1O95476 244 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 ZNF200P98182 395 aaPredicted RBP16.2■□□□□ 0.18
PRKCH-207ENST00000553831 NIPA1Q7RTP0 329 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 PLA2G4DQ86XP0 818 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 GTF3C6Q969F1 213 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 VWCEQ96DN2 955 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 SDF4Q9BRK5 362 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 JPH1Q9HDC5 661 aaPredicted RBP16.2■□□□□ 0.18
PRKCH-207ENST00000553831 ZNF215Q9UL58 517 aaPredicted RBP16.2■□□□□ 0.18
PRKCH-207ENST00000553831 PCDHA4Q9UN74 947 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 TANC1Q9C0D5 1861 aa16.2■□□□□ 0.18
PRKCH-207ENST00000553831 GSTTP1A0A1W2PQM5 241 aa16.19■□□□□ 0.18
PRKCH-207ENST00000553831 SMIM10L2AP0DMW4 78 aa16.19■□□□□ 0.18
PRKCH-207ENST00000553831 SMIM10L2BP0DMW5 78 aa16.19■□□□□ 0.18
PRKCH-207ENST00000553831 HOXC8P31273 242 aa16.19■□□□□ 0.18
PRKCH-207ENST00000553831 BFSP2Q13515 415 aa16.19■□□□□ 0.18
PRKCH-207ENST00000553831 NPY5RQ15761 445 aa16.19■□□□□ 0.18
PRKCH-207ENST00000553831 ZNF365Q70YC5 407 aa16.19■□□□□ 0.18
PRKCH-207ENST00000553831 CCDC155Q8N6L0 562 aa16.19■□□□□ 0.18
PRKCH-207ENST00000553831 DAGLBQ8NCG7 672 aa16.19■□□□□ 0.18
PRKCH-207ENST00000553831 CAGE1Q8TC20 777 aa16.19■□□□□ 0.18
PRKCH-207ENST00000553831 SEPT1Q8WYJ6 367 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms