RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 RNF169Q8NCN4 708 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 ANKZF1Q9H8Y5 726 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 PCDH18Q9HCL0 1135 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 TLK1Q9UKI8 766 aa9.73□□□□□ -0.85
GTF2A1-203ENST00000553612 SYCE1LA8MT33 242 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 RHOBTB1O94844 696 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 HARSP12081 509 aaKnown RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 KRT83P78385 493 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 DCTN2Q13561 401 aaKnown RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 ME3Q16798 604 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 GGT6Q6P531 493 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 MIGA2Q7L4E1 593 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 ZBTB46Q86UZ6 589 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 ANGPTL2Q9UKU9 493 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 GIPC1O14908 333 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 SP100P23497 879 aaPredicted RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 KYNUQ16719 465 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 TRMT1LQ7Z2T5 733 aaKnown RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 CDC26Q8NHZ8 85 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 PPP1R16BQ96T49 567 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 SENP2Q9HC62 589 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 ZSCAN5BA6NJL1 495 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 CHEK2O96017 543 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 MYCLP12524 364 aaPredicted RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 TNNC1P63316 161 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 PPIDQ08752 370 aaKnown RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 SULT6B1Q6IMI4 303 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 CDH24Q86UP0 819 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 CYP4X1Q8N118 509 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 TRAPPC9Q96Q05 1148 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 PRPF18Q99633 342 aaKnown RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 TRPC7Q9HCX4 862 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 PTPDC1A2A3K4 754 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 PLCD1P51178 756 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 ALDH5A1P51649 535 aaPredicted RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 CHMP6Q96FZ7 201 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 PAIP1Q9H074 479 aaKnown RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 ZRANB1Q9UGI0 708 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 ATP6V1HQ9UI12 483 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 STAM2O75886 525 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 ALDH1L1O75891 902 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 HEXIM1O94992 359 aaKnown RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 NLRP12P59046 1061 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 TYW1BQ6NUM6 668 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 OR2W6PQ8NHA6 318 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 ZNF570Q96NI8 536 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 MTMR6Q9Y217 621 aa9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 CAB39Q9Y376 341 aaPredicted RBP9.72□□□□□ -0.85
GTF2A1-203ENST00000553612 SCAPERQ9BY12 1400 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 NONOQ15233 471 aaKnown RBP eCLIP9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 TRPM8Q7Z2W7 1104 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 ARHGAP24Q8N264 748 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 SLC26A6Q9BXS9 759 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 RAB17Q9H0T7 212 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 TSPAN4O14817 238 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 LARGE1O95461 756 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 KCTD4Q8WVF5 259 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 HPS1Q92902 700 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 ATP6V1G3Q96LB4 118 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 Q9H521 79 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 SLC12A7Q9Y666 1083 aa9.71□□□□□ -0.85
GTF2A1-203ENST00000553612 VWA3AA6NCI4 1184 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 PALM3A6NDB9 673 aaPredicted RBP9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 ZBTB11O95625 1053 aaPredicted RBP9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 SYF2O95926 243 aaKnown RBP9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 NDUFA8P51970 172 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 USP14P54578 494 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 RBL2Q08999 1139 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 FYB2Q5VWT5 728 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 RASSF3Q86WH2 238 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 CNGA4Q8IV77 575 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 TCAIMQ8N3R3 496 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 MAB21L3Q8N8X9 362 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 NLRP7Q8WX94 980 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 CCSER1Q9C0I3 900 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 NLRC4Q9NPP4 1024 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 ERBINQ96RT1 1412 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 PSMD14O00487 310 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 XPO1O14980 1071 aaKnown RBP9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 RTN2O75298 545 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 OXCT1P55809 520 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 FLOT2Q14254 428 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 NR1D2Q14995 579 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 CFAP70Q5T0N1 1121 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 SUPT20HQ8NEM7 779 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 RNF38Q9H0F5 515 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 HTR3EA5X5Y0 456 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 E9PMD0 336 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 CCRL2O00421 344 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 SNX2O60749 519 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 GUCY1B2O75343 617 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 CASP14P31944 242 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 TRPC1P48995 793 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 ADAM9Q13443 819 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 TRIM22Q8IYM9 498 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 PMEPA1Q969W9 287 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 CCDC138Q96M89 665 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 C2orf49Q9BVC5 232 aaPredicted RBP9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 NDUFB9Q9Y6M9 179 aa9.71□□□□□ -0.86
GTF2A1-203ENST00000553612 MAP2K7O14733 419 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms