RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 KATNAL1Q9BW62 490 aa26.97■■□□□ 1.91
TDP1-205ENST00000553527 VPS54Q9P1Q0 977 aa26.97■■□□□ 1.91
TDP1-205ENST00000553527 HDAC6Q9UBN7 1215 aa26.97■■□□□ 1.91
TDP1-205ENST00000553527 UBIAD1Q9Y5Z9 338 aa26.97■■□□□ 1.91
TDP1-205ENST00000553527 PPIGQ13427 754 aaKnown RBP eCLIP26.96■■□□□ 1.91
TDP1-205ENST00000553527 GDF6Q6KF10 455 aaPredicted RBP26.96■■□□□ 1.91
TDP1-205ENST00000553527 CYP2W1Q8TAV3 490 aa26.96■■□□□ 1.91
TDP1-205ENST00000553527 CDHR1Q96JP9 859 aa26.96■■□□□ 1.91
TDP1-205ENST00000553527 KIF2CQ99661 725 aa26.96■■□□□ 1.91
TDP1-205ENST00000553527 ZMYND12Q9H0C1 365 aa26.96■■□□□ 1.91
TDP1-205ENST00000553527 SLKQ9H2G2 1235 aaPredicted RBP26.96■■□□□ 1.91
TDP1-205ENST00000553527 JADE2Q9NQC1 790 aa26.96■■□□□ 1.91
TDP1-205ENST00000553527 DTNBO60941 627 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 F2P00734 622 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 ZNF76P36508 570 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 CLK2P49760 499 aaKnown RBP26.95■■□□□ 1.9
TDP1-205ENST00000553527 NEK4P51957 841 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 AK2P54819 239 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 UTP14CQ5TAP6 766 aaKnown RBP26.95■■□□□ 1.9
TDP1-205ENST00000553527 CPLX2Q6PUV4 134 aaKnown RBP26.95■■□□□ 1.9
TDP1-205ENST00000553527 SCLYQ96I15 445 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 RNPC3Q96LT9 517 aaKnown RBP26.95■■□□□ 1.9
TDP1-205ENST00000553527 GPR20Q99678 358 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 SENP7Q9BQF6 1050 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 MXRA8Q9BRK3 442 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 C16orf70Q9BSU1 422 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 TPCN1Q9ULQ1 816 aa26.95■■□□□ 1.9
TDP1-205ENST00000553527 SCN5AQ14524 2016 aa26.94■■□□□ 1.9
TDP1-205ENST00000553527 GNA11P29992 359 aa26.94■■□□□ 1.9
TDP1-205ENST00000553527 AP3B2Q13367 1082 aa26.94■■□□□ 1.9
TDP1-205ENST00000553527 GIMAP8Q8ND71 665 aaPredicted RBP26.94■■□□□ 1.9
TDP1-205ENST00000553527 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.94■■□□□ 1.9
TDP1-205ENST00000553527 WNT8AQ9H1J5 351 aa26.94■■□□□ 1.9
TDP1-205ENST00000553527 ESYT2A0FGR8 921 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 H3BRB1 525 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 HAS3O00219 553 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 LGALS2P05162 132 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 HOXD8P13378 290 aaPredicted RBP26.93■■□□□ 1.9
TDP1-205ENST00000553527 KCNA2P16389 499 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 SCRN1Q12765 414 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 RABEP1Q15276 862 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 C16orf59Q7L2K0 433 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 REXO1Q8N1G1 1221 aaKnown RBP26.93■■□□□ 1.9
TDP1-205ENST00000553527 RASGRP4Q8TDF6 673 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 TUT1Q9H6E5 874 aaKnown RBP26.93■■□□□ 1.9
TDP1-205ENST00000553527 GTF2IRD1Q9UHL9 959 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 KAT6AQ92794 2004 aa26.93■■□□□ 1.9
TDP1-205ENST00000553527 SREBF1P36956 1147 aa26.92■■□□□ 1.9
TDP1-205ENST00000553527 NLRP5P59047 1200 aa26.92■■□□□ 1.9
TDP1-205ENST00000553527 ANKRD1Q15327 319 aa26.92■■□□□ 1.9
TDP1-205ENST00000553527 ZNF365Q70YC5 407 aa26.92■■□□□ 1.9
TDP1-205ENST00000553527 SESTD1Q86VW0 696 aa26.92■■□□□ 1.9
TDP1-205ENST00000553527 TEX2Q8IWB9 1127 aa26.92■■□□□ 1.9
TDP1-205ENST00000553527 CCDC148Q8NFR7 591 aa26.92■■□□□ 1.9
TDP1-205ENST00000553527 IL23AQ9NPF7 189 aa26.92■■□□□ 1.9
TDP1-205ENST00000553527 KCNH7Q9NS40 1196 aa26.92■■□□□ 1.9
TDP1-205ENST00000553527 MAFGO15525 162 aa26.91■■□□□ 1.9
TDP1-205ENST00000553527 ARP10275 920 aa26.91■■□□□ 1.9
TDP1-205ENST00000553527 ARHGAP4P98171 946 aa26.91■■□□□ 1.9
TDP1-205ENST00000553527 ZNF200P98182 395 aaPredicted RBP26.91■■□□□ 1.9
TDP1-205ENST00000553527 CEP55Q53EZ4 464 aa26.91■■□□□ 1.9
TDP1-205ENST00000553527 TMEM240Q5SV17 173 aa26.91■■□□□ 1.9
TDP1-205ENST00000553527 TRIM50Q86XT4 487 aa26.91■■□□□ 1.9
TDP1-205ENST00000553527 RETREG2Q8NC44 543 aa26.91■■□□□ 1.9
TDP1-205ENST00000553527 AIFM3Q96NN9 605 aa26.91■■□□□ 1.9
TDP1-205ENST00000553527 UIMC1Q96RL1 719 aa26.91■■□□□ 1.9
TDP1-205ENST00000553527 DEXIO95424 95 aa26.9■■□□□ 1.9
TDP1-205ENST00000553527 DEFB128Q7Z7B8 93 aa26.9■■□□□ 1.9
TDP1-205ENST00000553527 BICD2Q8TD16 824 aa26.9■■□□□ 1.9
TDP1-205ENST00000553527 PFKFB2O60825 505 aa26.89■■□□□ 1.9
TDP1-205ENST00000553527 TCF7P36402 384 aaPredicted RBP26.89■■□□□ 1.9
TDP1-205ENST00000553527 BFSP2Q13515 415 aa26.89■■□□□ 1.9
TDP1-205ENST00000553527 NECAB1Q8N987 351 aa26.89■■□□□ 1.9
TDP1-205ENST00000553527 SH3GLB2Q9NR46 395 aa26.89■■□□□ 1.9
TDP1-205ENST00000553527 FGBP02675 491 aa26.88■■□□□ 1.89
TDP1-205ENST00000553527 HIC1Q14526 733 aa26.88■■□□□ 1.89
TDP1-205ENST00000553527 Q7L0L9 218 aa26.88■■□□□ 1.89
TDP1-205ENST00000553527 OTOP2Q7RTS6 562 aa26.88■■□□□ 1.89
TDP1-205ENST00000553527 SEPT1Q8WYJ6 367 aa26.88■■□□□ 1.89
TDP1-205ENST00000553527 GSTTP1A0A1W2PQM5 241 aa26.87■■□□□ 1.89
TDP1-205ENST00000553527 MEIS1O00470 390 aa26.87■■□□□ 1.89
TDP1-205ENST00000553527 CDKL5O76039 1030 aa26.87■■□□□ 1.89
TDP1-205ENST00000553527 MCTP2Q6DN12 878 aa26.87■■□□□ 1.89
TDP1-205ENST00000553527 PSRC1Q6PGN9 363 aaPredicted RBP26.87■■□□□ 1.89
TDP1-205ENST00000553527 PLA2G4DQ86XP0 818 aa26.87■■□□□ 1.89
TDP1-205ENST00000553527 RPUSD2Q8IZ73 545 aaKnown RBP26.87■■□□□ 1.89
TDP1-205ENST00000553527 CTAGE1Q96RT6 745 aa26.87■■□□□ 1.89
TDP1-205ENST00000553527 SDF4Q9BRK5 362 aa26.87■■□□□ 1.89
TDP1-205ENST00000553527 AGO4Q9HCK5 861 aaKnown RBP26.87■■□□□ 1.89
TDP1-205ENST00000553527 FAM86B1E9PN63 330 aa26.86■■□□□ 1.89
TDP1-205ENST00000553527 DDX39AO00148 427 aaKnown RBP26.86■■□□□ 1.89
TDP1-205ENST00000553527 ST18O60284 1047 aa26.86■■□□□ 1.89
TDP1-205ENST00000553527 FAM86B2P0C5J1 330 aa26.86■■□□□ 1.89
TDP1-205ENST00000553527 IQCF3P0C7M6 154 aa26.86■■□□□ 1.89
TDP1-205ENST00000553527 SMIM10L2AP0DMW4 78 aa26.86■■□□□ 1.89
TDP1-205ENST00000553527 SMIM10L2BP0DMW5 78 aa26.86■■□□□ 1.89
TDP1-205ENST00000553527 ME3Q16798 604 aa26.86■■□□□ 1.89
TDP1-205ENST00000553527 CCDC155Q8N6L0 562 aa26.86■■□□□ 1.89
TDP1-205ENST00000553527 JPH1Q9HDC5 661 aaPredicted RBP26.86■■□□□ 1.89
TDP1-205ENST00000553527 SLC9A2Q9UBY0 812 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms