RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 PLA2G6O60733 806 aa17.11■□□□□ 0.33
ABCD4-218ENST00000553486 COBLO75128 1261 aa17.11■□□□□ 0.33
ABCD4-218ENST00000553486 PBX1P40424 430 aa17.11■□□□□ 0.33
ABCD4-218ENST00000553486 CAP1Q01518 475 aa17.11■□□□□ 0.33
ABCD4-218ENST00000553486 MCM6Q14566 821 aa17.11■□□□□ 0.33
ABCD4-218ENST00000553486 DCAF15Q66K64 600 aa17.11■□□□□ 0.33
ABCD4-218ENST00000553486 THAP9Q9H5L6 903 aa17.11■□□□□ 0.33
ABCD4-218ENST00000553486 VCPKMTQ9H867 229 aa17.11■□□□□ 0.33
ABCD4-218ENST00000553486 ZFYVE28Q9HCC9 887 aa17.11■□□□□ 0.33
ABCD4-218ENST00000553486 KCNMB3Q9NPA1 279 aa17.11■□□□□ 0.33
ABCD4-218ENST00000553486 AKR1B15C9JRZ8 316 aaPredicted RBP17.1■□□□□ 0.33
ABCD4-218ENST00000553486 IRF6O14896 467 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 N4BP3O15049 544 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 TBX3O15119 743 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 STX10O60499 249 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 TUBB4AP04350 444 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 CETPP11597 493 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 CCNE1P24864 410 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 COPB1P53618 953 aaKnown RBP17.1■□□□□ 0.33
ABCD4-218ENST00000553486 HYIQ5T013 277 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 PRPF38BQ5VTL8 546 aaKnown RBP17.1■□□□□ 0.33
ABCD4-218ENST00000553486 ITIH6Q6UXX5 1313 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 UNC13DQ70J99 1090 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 MIGA2Q7L4E1 593 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 FAM160B2Q86V87 743 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 TC2NQ8N9U0 490 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 CRYGNQ8WXF5 182 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 BAG1Q99933 345 aaPredicted RBP17.1■□□□□ 0.33
ABCD4-218ENST00000553486 PIK3CDO00329 1044 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 ASNSP08243 561 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 TPM1P09493 284 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 EEF1GP26641 437 aaKnown RBP17.1■□□□□ 0.33
ABCD4-218ENST00000553486 SREBF1P36956 1147 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 Q4G0T1 1027 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 TRIM47Q96LD4 638 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 NUDT12Q9BQG2 462 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 MAGEC2Q9UBF1 373 aaPredicted RBP17.1■□□□□ 0.33
ABCD4-218ENST00000553486 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.1■□□□□ 0.334e-7■□□□□ 11.3
ABCD4-218ENST00000553486 STK24Q9Y6E0 443 aa17.1■□□□□ 0.33
ABCD4-218ENST00000553486 TRIM49BA6NDI0 452 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 MYMKA6NI61 221 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 GTF2F1P35269 517 aaKnown RBP eCLIP17.09■□□□□ 0.33
ABCD4-218ENST00000553486 CCT6AP40227 531 aaKnown RBP17.09■□□□□ 0.33
ABCD4-218ENST00000553486 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 PPIL2Q13356 520 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 SNAPC2Q13487 334 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 KIAA1755Q5JYT7 1200 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 P2RX5Q93086 422 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 PPP1R13BQ96KQ4 1090 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 PANX2Q96RD6 677 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 ZNF341Q9BYN7 854 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 ZCCHC17Q9NP64 241 aaKnown RBP17.09■□□□□ 0.33
ABCD4-218ENST00000553486 ATAD5Q96QE3 1844 aa17.09■□□□□ 0.33
ABCD4-218ENST00000553486 ZSCAN12O43309 604 aa17.08■□□□□ 0.33
ABCD4-218ENST00000553486 ADKP55263 362 aaKnown RBP17.08■□□□□ 0.33
ABCD4-218ENST00000553486 STK4Q13043 487 aa17.08■□□□□ 0.33
ABCD4-218ENST00000553486 PSMD2Q13200 908 aa17.08■□□□□ 0.33
ABCD4-218ENST00000553486 TTI2Q6NXR4 508 aa17.08■□□□□ 0.33
ABCD4-218ENST00000553486 CREBRFQ8IUR6 639 aa17.08■□□□□ 0.33
ABCD4-218ENST00000553486 TMEM139Q8IV31 216 aa17.08■□□□□ 0.33
ABCD4-218ENST00000553486 ARMC5Q96C12 935 aa17.08■□□□□ 0.33
ABCD4-218ENST00000553486 SRRTQ9BXP5 876 aaKnown RBP17.08■□□□□ 0.33
ABCD4-218ENST00000553486 VPS16Q9H269 839 aa17.08■□□□□ 0.33
ABCD4-218ENST00000553486 RANBP17Q9H2T7 1088 aaKnown RBP17.08■□□□□ 0.33
ABCD4-218ENST00000553486 TAB2Q9NYJ8 693 aa17.08■□□□□ 0.33
ABCD4-218ENST00000553486 FEM1BQ9UK73 627 aa17.08■□□□□ 0.33
ABCD4-218ENST00000553486 BTBD19C9JJ37 291 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 RIOK3O14730 519 aaKnown RBP17.07■□□□□ 0.32
ABCD4-218ENST00000553486 INPP5BP32019 993 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 CIITAP33076 1130 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 PPATQ06203 517 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 TRIM14Q14142 442 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 FAM114A1Q8IWE2 563 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 FAM20AQ96MK3 541 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 BMP2KQ9NSY1 1161 aaPredicted RBP17.07■□□□□ 0.32
ABCD4-218ENST00000553486 SMCHD1A6NHR9 2005 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 POTEFA5A3E0 1075 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 TLR2O60603 784 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 CYP3A4P08684 503 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 FCER1AP12319 257 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 PMS1P54277 932 aaKnown RBP17.07■□□□□ 0.32
ABCD4-218ENST00000553486 RBL2Q08999 1139 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 ARHGEF6Q15052 776 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 PRR16Q569H4 304 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 HAUS3Q68CZ6 603 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 IRF2BP1Q8IU81 584 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 CSGALNACT2Q8N6G5 542 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 ERMNQ8TAM6 284 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 ZNF592Q92610 1267 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 GJA10Q969M2 543 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 KIFC2Q96AC6 838 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 CCDC51Q96ER9 411 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 P2RX7Q99572 595 aaKnown RBP17.07■□□□□ 0.32
ABCD4-218ENST00000553486 NAA15Q9BXJ9 866 aaKnown RBP17.07■□□□□ 0.32
ABCD4-218ENST00000553486 GINM1Q9NU53 330 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 ZNF112Q9UJU3 913 aa17.07■□□□□ 0.32
ABCD4-218ENST00000553486 MRPL11Q9Y3B7 192 aaKnown RBP17.07■□□□□ 0.32
ABCD4-218ENST00000553486 OPLAHO14841 1288 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms