RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 CYP2W1Q8TAV3 490 aa21.03■□□□□ 0.96
CPSF2-202ENST00000553427 GPR20Q99678 358 aa21.03■□□□□ 0.96
CPSF2-202ENST00000553427 GDF15Q99988 308 aa21.03■□□□□ 0.96
CPSF2-202ENST00000553427 ALG1Q9BT22 464 aa21.03■□□□□ 0.96
CPSF2-202ENST00000553427 KATNAL1Q9BW62 490 aa21.03■□□□□ 0.96
CPSF2-202ENST00000553427 NFASCO94856 1347 aa21.03■□□□□ 0.96
CPSF2-202ENST00000553427 IGLV3-22A0A075B6J6 115 aa21.02■□□□□ 0.96
CPSF2-202ENST00000553427 FAM86B1E9PN63 330 aa21.02■□□□□ 0.96
CPSF2-202ENST00000553427 HAS3O00219 553 aa21.02■□□□□ 0.96
CPSF2-202ENST00000553427 NOP56O00567 594 aaKnown RBP21.02■□□□□ 0.96
CPSF2-202ENST00000553427 JAK2O60674 1132 aa21.02■□□□□ 0.96
CPSF2-202ENST00000553427 ATP9AO75110 1047 aa21.02■□□□□ 0.96
CPSF2-202ENST00000553427 FAM86B2P0C5J1 330 aa21.02■□□□□ 0.96
CPSF2-202ENST00000553427 SYN1P17600 705 aa21.02■□□□□ 0.96
CPSF2-202ENST00000553427 MCM2P49736 904 aa21.02■□□□□ 0.96
CPSF2-202ENST00000553427 USP11P51784 963 aa21.02■□□□□ 0.96
CPSF2-202ENST00000553427 SETQ01105 290 aaPredicted RBP21.02■□□□□ 0.96
CPSF2-202ENST00000553427 BCAS3Q9H6U6 928 aa21.02■□□□□ 0.96
CPSF2-202ENST00000553427 LTBP2Q14767 1821 aa21.01■□□□□ 0.95
CPSF2-202ENST00000553427 TRIM43BA6NCK2 446 aa21.01■□□□□ 0.95
CPSF2-202ENST00000553427 BMP8BP34820 402 aa21.01■□□□□ 0.95
CPSF2-202ENST00000553427 ZNF76P36508 570 aa21.01■□□□□ 0.95
CPSF2-202ENST00000553427 MAGEA10P43363 369 aaPredicted RBP21.01■□□□□ 0.95
CPSF2-202ENST00000553427 NBPF20Q3BBV1 942 aa21.01■□□□□ 0.95
CPSF2-202ENST00000553427 KRT25Q7Z3Z0 450 aa21.01■□□□□ 0.95
CPSF2-202ENST00000553427 CCDC83Q8IWF9 413 aa21.01■□□□□ 0.95
CPSF2-202ENST00000553427 TRIM43Q96BQ3 446 aaPredicted RBP21.01■□□□□ 0.95
CPSF2-202ENST00000553427 AGO4Q9HCK5 861 aaKnown RBP21.01■□□□□ 0.95
CPSF2-202ENST00000553427 PRDM5Q9NQX1 630 aaPredicted RBP21.01■□□□□ 0.95
CPSF2-202ENST00000553427 KCNJ14Q9UNX9 436 aa21.01■□□□□ 0.95
CPSF2-202ENST00000553427 MYH7BA7E2Y1 1941 aa21■□□□□ 0.95
CPSF2-202ENST00000553427 ZNF286BP0CG31 522 aa21■□□□□ 0.95
CPSF2-202ENST00000553427 ARP10275 920 aa21■□□□□ 0.95
CPSF2-202ENST00000553427 HMGN5P82970 282 aaKnown RBP21■□□□□ 0.95
CPSF2-202ENST00000553427 SH3RF1Q7Z6J0 888 aa21■□□□□ 0.95
CPSF2-202ENST00000553427 C16orf70Q9BSU1 422 aa21■□□□□ 0.95
CPSF2-202ENST00000553427 JPH1Q9HDC5 661 aaPredicted RBP21■□□□□ 0.95
CPSF2-202ENST00000553427 TMEM39AQ9NV64 488 aa21■□□□□ 0.95
CPSF2-202ENST00000553427 EDIL3O43854 480 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 SORBS3O60504 671 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 B4GALT4O60513 344 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 LGALS2P05162 132 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 SUPT20HL2P0C7V6 817 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 PSEN2P49810 448 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 ITGB3BPQ13352 177 aaPredicted RBP20.99■□□□□ 0.95
CPSF2-202ENST00000553427 MFSD10Q14728 455 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 MOXD1Q6UVY6 613 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 CHRDL2Q6WN34 429 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 PLA2G4DQ86XP0 818 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 TBCKQ8TEA7 893 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 LENG9Q96B70 501 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 LBHD1Q9BQE6 289 aaPredicted RBP20.99■□□□□ 0.95
CPSF2-202ENST00000553427 SDF4Q9BRK5 362 aa20.99■□□□□ 0.95
CPSF2-202ENST00000553427 CYP3A7-CYP3A51PA0A087WV96 503 aa20.98■□□□□ 0.95
CPSF2-202ENST00000553427 A0A1W2PPC1 479 aa20.98■□□□□ 0.95
CPSF2-202ENST00000553427 CYP3A7P24462 503 aa20.98■□□□□ 0.95
CPSF2-202ENST00000553427 NONOQ15233 471 aaKnown RBP eCLIP20.98■□□□□ 0.95
CPSF2-202ENST00000553427 SEPT1Q8WYJ6 367 aa20.98■□□□□ 0.95
CPSF2-202ENST00000553427 BRMS1Q9HCU9 246 aa20.98■□□□□ 0.95
CPSF2-202ENST00000553427 GJB4Q9NTQ9 266 aa20.98■□□□□ 0.95
CPSF2-202ENST00000553427 DTNBO60941 627 aa20.97■□□□□ 0.95
CPSF2-202ENST00000553427 KIAA0753Q2KHM9 967 aa20.97■□□□□ 0.95
CPSF2-202ENST00000553427 MBOAT7Q96N66 472 aa20.97■□□□□ 0.95
CPSF2-202ENST00000553427 TRPV6Q9H1D0 765 aa20.97■□□□□ 0.95
CPSF2-202ENST00000553427 SLC9A2Q9UBY0 812 aa20.97■□□□□ 0.95
CPSF2-202ENST00000553427 ZNF215Q9UL58 517 aaPredicted RBP20.97■□□□□ 0.95
CPSF2-202ENST00000553427 COLQQ9Y215 455 aaPredicted RBP20.97■□□□□ 0.95
CPSF2-202ENST00000553427 CCDC194A0A1B0GVG4 234 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 H3BRB1 525 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 IPO5O00410 1097 aaKnown RBP20.96■□□□□ 0.95
CPSF2-202ENST00000553427 CD2BP2O95400 341 aaKnown RBP20.96■□□□□ 0.95
CPSF2-202ENST00000553427 TIMP1P01033 207 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 MMP1P03956 469 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 RAG1P15918 1043 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 KRT2P35908 639 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 TCF7P36402 384 aaPredicted RBP20.96■□□□□ 0.95
CPSF2-202ENST00000553427 TRIM29Q14134 588 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 PRR16Q569H4 304 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 FAM47CQ5HY64 1035 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 TNFRSF25Q93038 417 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 TMX3Q96JJ7 454 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 TUT1Q9H6E5 874 aaKnown RBP20.96■□□□□ 0.95
CPSF2-202ENST00000553427 TBC1D22BQ9NU19 505 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 TRMT13Q9NUP7 481 aaKnown RBP20.96■□□□□ 0.95
CPSF2-202ENST00000553427 PKD2L1Q9P0L9 805 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 GTF2IRD1Q9UHL9 959 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 TELO2Q9Y4R8 837 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 EMSYQ7Z589 1322 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 DOCK5Q9H7D0 1870 aa20.96■□□□□ 0.95
CPSF2-202ENST00000553427 GSTTP1A0A1W2PQM5 241 aa20.95■□□□□ 0.94
CPSF2-202ENST00000553427 DHX15O43143 795 aaKnown RBP20.95■□□□□ 0.94
CPSF2-202ENST00000553427 LGR5O75473 907 aa20.95■□□□□ 0.94
CPSF2-202ENST00000553427 ITGB8P26012 769 aa20.95■□□□□ 0.94
CPSF2-202ENST00000553427 HOXC8P31273 242 aa20.95■□□□□ 0.94
CPSF2-202ENST00000553427 SP4Q02446 784 aa20.95■□□□□ 0.94
CPSF2-202ENST00000553427 Q4G0T1 1027 aa20.95■□□□□ 0.94
CPSF2-202ENST00000553427 C7orf31Q8N865 590 aa20.95■□□□□ 0.94
CPSF2-202ENST00000553427 OXER1Q8TDS5 423 aa20.95■□□□□ 0.94
CPSF2-202ENST00000553427 ZNF577Q9BSK1 485 aa20.95■□□□□ 0.94
CPSF2-202ENST00000553427 NOC4LQ9BVI4 516 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms