RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ZNF76P36508 570 aa16.84■□□□□ 0.29
MTHFD1-204ENST00000553405 ORC2Q13416 577 aaPredicted RBP16.84■□□□□ 0.29
MTHFD1-204ENST00000553405 RILPL1Q5EBL4 403 aa16.84■□□□□ 0.29
MTHFD1-204ENST00000553405 TTC38Q5R3I4 469 aa16.84■□□□□ 0.29
MTHFD1-204ENST00000553405 METTL7BQ6UX53 244 aa16.84■□□□□ 0.29
MTHFD1-204ENST00000553405 IPO5O00410 1097 aaKnown RBP16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 PSMD10O75832 226 aa16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 CCNE2O96020 404 aa16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 F13A1P00488 732 aa16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 GH1P01241 217 aa16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 SPIRE1Q08AE8 756 aa16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 GNL2Q13823 731 aaKnown RBP16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 HSDL1Q3SXM5 330 aa16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 UIMC1Q96RL1 719 aa16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 NAP1L4Q99733 375 aaKnown RBP16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 ZSCAN16Q9H4T2 348 aaPredicted RBP16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 XPNPEP3Q9NQH7 507 aa16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 VAV3Q9UKW4 847 aa16.83■□□□□ 0.28
MTHFD1-204ENST00000553405 TBX3O15119 743 aa16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 DYNC1LI2O43237 492 aaPredicted RBP16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 NEDD9Q14511 834 aa16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 LRRC41Q15345 812 aa16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 ZNF174Q15697 407 aa16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 CYFIP1Q7L576 1253 aa16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 UBE2Q1Q7Z7E8 422 aa16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 TNS4Q8IZW8 715 aa16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 AFG1LQ8WV93 481 aa16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 RIT2Q99578 217 aa16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 FTOQ9C0B1 505 aaKnown RBP eCLIP16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 PKD2L1Q9P0L9 805 aa16.82■□□□□ 0.28
MTHFD1-204ENST00000553405 NEMFO60524 1076 aa16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 ATP2B1P20020 1258 aa16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 MCM7P33993 719 aa16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 LAMC2Q13753 1193 aa16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 PTPAQ15257 358 aa16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 FSCN1Q16658 493 aaKnown RBP16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 GIMAP8Q8ND71 665 aaPredicted RBP16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 OR6J1Q8NGC5 347 aa16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 PPTC7Q8NI37 304 aa16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 FAM20AQ96MK3 541 aa16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 GPR20Q99678 358 aa16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 ZNF577Q9BSK1 485 aa16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 NOL7Q9UMY1 257 aaKnown RBP16.81■□□□□ 0.28
MTHFD1-204ENST00000553405 GSTTP1A0A1W2PQM5 241 aa16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 SORBS3O60504 671 aa16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 ATG7O95352 703 aa16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 MMP3P08254 477 aa16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 BEX3Q00994 111 aa16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 FOXD4L5Q5VV16 416 aaPredicted RBP16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 DHX37Q8IY37 1157 aaKnown RBP16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 FOXD4L4Q8WXT5 416 aaPredicted RBP16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 IPO9Q96P70 1041 aaKnown RBP16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 JPH1Q9HDC5 661 aaPredicted RBP16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 TBC1D22BQ9NU19 505 aa16.8■□□□□ 0.28
MTHFD1-204ENST00000553405 SCN10AQ9Y5Y9 1956 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 IGKV6D-21A0A0A0MT36 114 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 C6orf222P0C671 652 aaPredicted RBP16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 COL6A1P12109 1028 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 ATP2C1P98194 919 aaPredicted RBP16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 PTGDRQ13258 359 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 IL17AQ16552 155 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 SPATA33Q96N06 139 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 USP28Q96RU2 1077 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 PCYT2Q99447 389 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 TMEM106CQ9BVX2 250 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 UNC45AQ9H3U1 944 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 SLC9A2Q9UBY0 812 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 PHF24Q9UPV7 400 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 CLIC4Q9Y696 253 aa16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 MORC2Q9Y6X9 1032 aaPredicted RBP16.79■□□□□ 0.28
MTHFD1-204ENST00000553405 WDR81Q562E7 1941 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 DNM1LO00429 736 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 CAPN2P17655 700 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 EN2P19622 333 aaPredicted RBP16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 NASPP49321 788 aaPredicted RBP16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 ACTR2P61160 394 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 PPP2R5CQ13362 524 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 CALCRLQ16602 461 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 LRCH2Q5VUJ6 765 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 ZNF746Q6NUN9 644 aaPredicted RBP16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 ABHD15Q6UXT9 468 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 ANKLE1Q8NAG6 615 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 DIS3LQ8TF46 1054 aaKnown RBP16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 KAT2BQ92831 832 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 CHAMP1Q96JM3 812 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 SDF4Q9BRK5 362 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 TSEN34Q9BSV6 310 aaKnown RBP16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 AP5M1Q9H0R1 490 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 MLXIPQ9HAP2 919 aa16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 CIZ1Q9ULV3 898 aaPredicted RBP16.78■□□□□ 0.28
MTHFD1-204ENST00000553405 ELP1O95163 1332 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 EML1O00423 815 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 GAS7O60861 476 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 PPFIA4O75335 1185 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 LGR5O75473 907 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 OR52Z1P0C646 297 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 CPT1AP50416 773 aa16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 PURAQ00577 322 aaKnown RBP16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
MTHFD1-204ENST00000553405 KCNA10Q16322 511 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms