RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ADRB1P08588 477 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 RSPH10BP0C881 870 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 AKR1B1P15121 316 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 GTF2F1P35269 517 aaKnown RBP eCLIP6.16□□□□□ -1.42
CKAP4-203ENST00000553039 CDK8P49336 464 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 ARSIQ5FYB1 569 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 CCDC105Q8IYK2 499 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 DTWD2Q8NBA8 298 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 FLCNQ8NFG4 579 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 C1orf216Q8TAB5 229 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 MORC4Q8TE76 937 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 SCFD2Q8WU76 684 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 CHURC1Q8WUH1 139 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 TSC1Q92574 1164 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 TRERF1Q96PN7 1200 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 NEK1Q96PY6 1258 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 CDCA3Q99618 268 aaPredicted RBP6.16□□□□□ -1.42
CKAP4-203ENST00000553039 IFIH1Q9BYX4 1025 aaKnown RBP6.16□□□□□ -1.42
CKAP4-203ENST00000553039 HOMER2Q9NSB8 354 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 METRNQ9UJH8 293 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 PLAGL2Q9UPG8 496 aa6.16□□□□□ -1.42
CKAP4-203ENST00000553039 ANKRD11Q6UB99 2663 aaPredicted RBP6.16□□□□□ -1.42
CKAP4-203ENST00000553039 MYO7AQ13402 2215 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 SPTBN2O15020 2390 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 FAM208BQ5VWN6 2430 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 HAX1O00165 279 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 PIK3CDO00329 1044 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 LZTS3O60299 673 aaPredicted RBP6.15□□□□□ -1.42
CKAP4-203ENST00000553039 MMP1P03956 469 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 HOXB8P17481 243 aaPredicted RBP6.15□□□□□ -1.42
CKAP4-203ENST00000553039 AOC1P19801 751 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 ZAP70P43403 619 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 NRIP1P48552 1158 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 LMNB2Q03252 620 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 PDE4BQ07343 736 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 COL9A3Q14050 684 aaPredicted RBP6.15□□□□□ -1.42
CKAP4-203ENST00000553039 PPP2R5BQ15173 497 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 PLEKHG4Q58EX7 1191 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 ZNF618Q5T7W0 954 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 GDF6Q6KF10 455 aaPredicted RBP6.15□□□□□ -1.42
CKAP4-203ENST00000553039 FBXO16Q8IX29 292 aaPredicted RBP6.15□□□□□ -1.42
CKAP4-203ENST00000553039 RPAP2Q8IXW5 612 aaPredicted RBP6.15□□□□□ -1.42
CKAP4-203ENST00000553039 MRPL50Q8N5N7 158 aaKnown RBP6.15□□□□□ -1.42
CKAP4-203ENST00000553039 SUSD6Q92537 303 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 APBB2Q92870 758 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 P2RX5Q93086 422 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 NECTIN4Q96NY8 510 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 KATNAL1Q9BW62 490 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 GPR108Q9NPR9 543 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 A1CFQ9NQ94 594 aaKnown RBP6.15□□□□□ -1.42
CKAP4-203ENST00000553039 ATP8A2Q9NTI2 1148 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 NYAP2Q9P242 653 aa6.15□□□□□ -1.42
CKAP4-203ENST00000553039 CDV3Q9UKY7 258 aaKnown RBP6.15□□□□□ -1.42
CKAP4-203ENST00000553039 ATAD5Q96QE3 1844 aa6.15□□□□□ -1.43
CKAP4-203ENST00000553039 CACNA1FO60840 1977 aa6.15□□□□□ -1.43
CKAP4-203ENST00000553039 SMAPO00193 183 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 GNAI3P08754 354 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 FBXO45P0C2W1 286 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 TXNP10599 105 aaKnown RBP6.14□□□□□ -1.43
CKAP4-203ENST00000553039 HOXB3P14651 431 aaPredicted RBP6.14□□□□□ -1.43
CKAP4-203ENST00000553039 THPOP40225 353 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 BTG3Q14201 252 aaPredicted RBP6.14□□□□□ -1.43
CKAP4-203ENST00000553039 TTF1Q15361 905 aaPredicted RBP6.14□□□□□ -1.43
CKAP4-203ENST00000553039 DGKDQ16760 1214 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 SWI5Q1ZZU3 235 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 CRTC2Q53ET0 693 aaPredicted RBP6.14□□□□□ -1.43
CKAP4-203ENST00000553039 VARS2Q5ST30 1063 aaKnown RBP6.14□□□□□ -1.43
CKAP4-203ENST00000553039 PDE12Q6L8Q7 609 aaKnown RBP6.14□□□□□ -1.43
CKAP4-203ENST00000553039 CES5AQ6NT32 575 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 RUFY4Q6ZNE9 571 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 RBM23Q86U06 439 aaKnown RBP6.14□□□□□ -1.43
CKAP4-203ENST00000553039 RETREG3Q86VR2 466 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 SPPL3Q8TCT6 385 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 DYNLL2Q96FJ2 89 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 DCBLD2Q96PD2 775 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 DCP1AQ9NPI6 582 aaPredicted RBP6.14□□□□□ -1.43
CKAP4-203ENST00000553039 PIH1D3Q9NQM4 214 aaKnown RBP6.14□□□□□ -1.43
CKAP4-203ENST00000553039 RNF146Q9NTX7 359 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 GTF2IRD1Q9UHL9 959 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 SYNPO2Q9UMS6 1093 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 LHX6Q9UPM6 363 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 MYH13Q9UKX3 1938 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 GPR179Q6PRD1 2367 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 C5orf42Q9H799 3197 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 CEP250Q9BV73 2442 aa6.14□□□□□ -1.43
CKAP4-203ENST00000553039 REV3LO60673 3130 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 DCDC2BA2VCK2 349 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 NDUFB10O96000 172 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 BMP3P12645 472 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 ALAS1P13196 640 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 TCF3P15923 654 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 PTGS1P23219 599 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 MARSP56192 900 aaKnown RBP6.13□□□□□ -1.43
CKAP4-203ENST00000553039 FUT2Q10981 343 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 TCTN1Q2MV58 587 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 TMEM63BQ5T3F8 832 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 SWT1Q5T5J6 900 aaKnown RBP6.13□□□□□ -1.43
CKAP4-203ENST00000553039 C12orf60Q5U649 245 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 LYPD8Q6UX82 237 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 NSMFQ6X4W1 530 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms