RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 LARGE1O95461 756 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 SMPD1P17405 629 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 SCRN1Q12765 414 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 HYAL1Q12794 435 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 CCDC178Q5BJE1 867 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 SNRNP48Q6IEG0 339 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 CNKSR3Q6P9H4 555 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 CLEC10AQ8IUN9 316 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 TMEM105Q8N8V8 129 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 NECAB1Q8N987 351 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 ZNF396Q96N95 335 aaPredicted RBP13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 SAMD11Q96NU1 681 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 TEX13BQ9BXU2 312 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 VCPKMTQ9H867 229 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 GRPEL1Q9HAV7 217 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 PPP1R9AQ9ULJ8 1098 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 CEP250Q9BV73 2442 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 NID2Q14112 1375 aa13.74□□□□□ -0.21
RBFOX1-214ENST00000552089 FGRP09769 529 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 CDK8P49336 464 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 ST3GAL1Q11201 340 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 ZSCAN23Q3MJ62 389 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 SBK1Q52WX2 424 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 BRAPQ7Z569 592 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 NSUN7Q8NE18 718 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 RIPOR3Q96MK2 946 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 SH2D4AQ9H788 454 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 ARHGEF10LQ9HCE6 1279 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 DLL3Q9NYJ7 618 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 RIPK3Q9Y572 518 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 INSL6Q9Y581 213 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 ABHD14A-ACY1A0A1B0GW23 586 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 VPS37CA5D8V6 355 aaPredicted RBP13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 CAVIN2O95810 425 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 TCTN1Q2MV58 587 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 C16orf86Q6ZW13 317 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 PPP1R13LQ8WUF5 828 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 ESR2Q92731 530 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 ZNF287Q9HBT7 754 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 TMX2Q9Y320 296 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 TAF6LQ9Y6J9 622 aa13.73□□□□□ -0.21
RBFOX1-214ENST00000552089 MCM3APO60318 1980 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 FAM208BQ5VWN6 2430 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 LINC01565O15544 149 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 CALM1P0DP23 149 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 CALM2P0DP24 149 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 CALM3P0DP25 149 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 AKR1B1P15121 316 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 CTDSPL2Q05D32 466 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 GPNMBQ14956 572 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 PTPN21Q16825 1174 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 CCDC183Q5T5S1 534 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 TMEM179Q6ZVK1 233 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 ANKRD35Q8N283 1001 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 SP7Q8TDD2 431 aaPredicted RBP13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 KCNG4Q8TDN1 519 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 GZF1Q9H116 711 aaPredicted RBP13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 INCENPQ9NQS7 918 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 POLR3EQ9NVU0 708 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 SWAP70Q9UH65 585 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 FRYLO94915 3013 aa13.72□□□□□ -0.21
RBFOX1-214ENST00000552089 SPTBN2O15020 2390 aa13.71□□□□□ -0.21
RBFOX1-214ENST00000552089 LAMA4Q16363 1823 aa13.71□□□□□ -0.21
RBFOX1-214ENST00000552089 FASNP49327 2511 aaKnown RBP13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 PTPDC1A2A3K4 754 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 EFCAB14O75071 495 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 PRDM1O75626 825 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 MYL3P08590 195 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 ICAM3P32942 547 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 ICA1Q05084 483 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 PPARAQ07869 468 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 APOBRQ0VD83 1088 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 UVSSAQ2YD98 709 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 SIAH1Q8IUQ4 282 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 FAM177A1Q8N128 213 aaPredicted RBP13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 GPT2Q8TD30 523 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 IGDCC4Q8TDY8 1250 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 IGFLR1Q9H665 355 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 STK36Q9NRP7 1315 aa13.71□□□□□ -0.22
RBFOX1-214ENST00000552089 KLF18A0A0U1RQI7 1052 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 SH2B2O14492 632 aaPredicted RBP13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 ZBTB43O43298 467 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 EYA4O95677 639 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 RASA1P20936 1047 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 NDUFV1P49821 464 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 PURAQ00577 322 aaKnown RBP13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 TMEM63BQ5T3F8 832 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 IQCA1Q86XH1 822 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 FBXO11Q86XK2 927 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 TMEM192Q8IY95 271 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 CCDC155Q8N6L0 562 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 MSLNLQ96KJ4 702 aa13.7□□□□□ -0.22
RBFOX1-214ENST00000552089 RPGRIP1Q96KN7 1286 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms