RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 SPATA33Q96N06 139 aa12.1□□□□□ -0.47
PTCH1-225ENST00000551845 CDX2Q99626 313 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-225ENST00000551845 CCDC194A0A1B0GVG4 234 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 A0A1W2PQ45 241 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-225ENST00000551845 A0A1W2PQY0 241 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 MEIS1O00470 390 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 ADAMTS3O15072 1205 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 COL9A1P20849 921 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 UBA1P22314 1058 aaKnown RBP12.09□□□□□ -0.47
PTCH1-225ENST00000551845 ARHGAP1Q07960 439 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTCH1-225ENST00000551845 DGKDQ16760 1214 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 C1orf53Q5VUE5 145 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 CYFIP1Q7L576 1253 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 KRT25Q7Z3Z0 450 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 CYP2W1Q8TAV3 490 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 SEZ6LQ9BYH1 1024 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 KCNH7Q9NS40 1196 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 GJB4Q9NTQ9 266 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 PRKAG2Q9UGJ0 569 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 KIF3AQ9Y496 699 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 UNC80Q8N2C7 3258 aa12.09□□□□□ -0.47
PTCH1-225ENST00000551845 M0R2N6 131 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 NOP56O00567 594 aaKnown RBP12.08□□□□□ -0.48
PTCH1-225ENST00000551845 SORBS3O60504 671 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 ATP9AO75110 1047 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
PTCH1-225ENST00000551845 ARP10275 920 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 CIITAP33076 1130 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 KRT2P35908 639 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 ITGA7Q13683 1181 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 NONOQ15233 471 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCH1-225ENST00000551845 KRT40Q6A162 431 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 METTL7BQ6UX53 244 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 NIPA1Q7RTP0 329 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 PLA2G4DQ86XP0 818 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 PPTC7Q8NI37 304 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 TBCKQ8TEA7 893 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 CRYGNQ8WXF5 182 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 MYLIPQ8WY64 445 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 C8orf76Q96K31 380 aa12.08□□□□□ -0.48
PTCH1-225ENST00000551845 MTG1Q9BT17 334 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-225ENST00000551845 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-225ENST00000551845 A0A0U1RQG5 324 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-225ENST00000551845 DCDC2CA8MYV0 355 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 FAM86B1E9PN63 330 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 ARVCFO00192 962 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 MMP1P03956 469 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 MMP3P08254 477 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 FAM86B2P0C5J1 330 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 RTP1P59025 263 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 PURAQ00577 322 aaKnown RBP12.07□□□□□ -0.48
PTCH1-225ENST00000551845 SEMA3FQ13275 785 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 NPY5RQ15761 445 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 TOX2Q96NM4 488 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 SDF4Q9BRK5 362 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 SEMA6BQ9H3T3 888 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 BCAS3Q9H6U6 928 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 PKD2L1Q9P0L9 805 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 ATP11BQ9Y2G3 1177 aa12.07□□□□□ -0.48
PTCH1-225ENST00000551845 BTBD18B2RXH4 712 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 FOSL2P15408 326 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 KCNA2P16389 499 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 CDK7P50613 346 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 FOSBP53539 338 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 SETQ01105 290 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-225ENST00000551845 TLE2Q04725 743 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 SNX17Q15036 470 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 INF2Q27J81 1249 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 TRIM60Q495X7 471 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 PRR16Q569H4 304 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 PIK3AP1Q6ZUJ8 805 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 DIS3L2Q8IYB7 885 aaKnown RBP12.06□□□□□ -0.48
PTCH1-225ENST00000551845 FBXO18Q8NFZ0 1043 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 OXER1Q8TDS5 423 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 SEPT1Q8WYJ6 367 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 NAP1L4Q99733 375 aaKnown RBP12.06□□□□□ -0.48
PTCH1-225ENST00000551845 ZNF577Q9BSK1 485 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 AGO4Q9HCK5 861 aaKnown RBP12.06□□□□□ -0.48
PTCH1-225ENST00000551845 TBC1D22BQ9NU19 505 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 SMC3Q9UQE7 1217 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 MROH7Q68CQ1 1323 aa12.06□□□□□ -0.48
PTCH1-225ENST00000551845 CYP3A7-CYP3A51PA0A087WV96 503 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 TLR3O15455 904 aaKnown RBP12.05□□□□□ -0.48
PTCH1-225ENST00000551845 CYP3A7P24462 503 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 CHMP4BP1P59074 171 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 PSMC6P62333 389 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 GUCY1B3Q02153 619 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 SP4Q02446 784 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 GNL2Q13823 731 aaKnown RBP12.05□□□□□ -0.48
PTCH1-225ENST00000551845 LETM2Q2VYF4 491 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 MOXD1Q6UVY6 613 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 ANKRD33Q7Z3H0 272 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 NEK8Q86SG6 692 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 GPR20Q99678 358 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 KATNAL1Q9BW62 490 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 JPH1Q9HDC5 661 aaPredicted RBP12.05□□□□□ -0.48
PTCH1-225ENST00000551845 SLC9A2Q9UBY0 812 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 PLXNA1Q9UIW2 1896 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms