RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 SAMD3Q8N6K7 520 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 IGDCC4Q8TDY8 1250 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 MYL10Q9BUA6 226 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 RNPEPQ9H4A4 650 aa20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 TUT1Q9H6E5 874 aaKnown RBP20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 SUPT16HQ9Y5B9 1047 aaKnown RBP20.72■□□□□ 0.91
PRPF40B-215ENST00000551418 SIP14410 1827 aa20.71■□□□□ 0.91
PRPF40B-215ENST00000551418 RSPH10B2B2RC85 870 aa20.71■□□□□ 0.91
PRPF40B-215ENST00000551418 RSPH10BP0C881 870 aa20.71■□□□□ 0.91
PRPF40B-215ENST00000551418 HOXC8P31273 242 aa20.71■□□□□ 0.91
PRPF40B-215ENST00000551418 CYFIP1Q7L576 1253 aa20.71■□□□□ 0.91
PRPF40B-215ENST00000551418 TRIM50Q86XT4 487 aa20.71■□□□□ 0.91
PRPF40B-215ENST00000551418 ATP6V0A1Q93050 837 aa20.71■□□□□ 0.91
PRPF40B-215ENST00000551418 HLA-CQ95604 372 aa20.71■□□□□ 0.91
PRPF40B-215ENST00000551418 C17orf80Q9BSJ5 609 aa20.71■□□□□ 0.91
PRPF40B-215ENST00000551418 COG5Q9UP83 839 aa20.71■□□□□ 0.91
PRPF40B-215ENST00000551418 C17orf102A2RUQ5 167 aa20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 SPATA31C2B4DYI2 1134 aa20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 USP17L6PQ6QN14 398 aa20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 MB21D2Q8IYB1 491 aaPredicted RBP20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 NCOA7Q8NI08 942 aa20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 KHSRPQ92945 711 aaKnown RBP eCLIP20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 INPP4AQ96PE3 977 aaPredicted RBP20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 TGS1Q96RS0 853 aaKnown RBP20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 EPHX3Q9H6B9 360 aa20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 SETD4Q9NVD3 440 aa20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 FRMPD4Q14CM0 1322 aa20.7■□□□□ 0.9
PRPF40B-215ENST00000551418 ERICH2A1L162 156 aa20.69■□□□□ 0.9
PRPF40B-215ENST00000551418 SGSM2O43147 1006 aa20.69■□□□□ 0.9
PRPF40B-215ENST00000551418 ICAM3P32942 547 aa20.69■□□□□ 0.9
PRPF40B-215ENST00000551418 IRX6P78412 446 aaPredicted RBP20.69■□□□□ 0.9
PRPF40B-215ENST00000551418 PLEKHG4Q58EX7 1191 aa20.69■□□□□ 0.9
PRPF40B-215ENST00000551418 RALYLQ86SE5 291 aaKnown RBP20.69■□□□□ 0.9
PRPF40B-215ENST00000551418 RUFY2Q8WXA3 655 aa20.69■□□□□ 0.9
PRPF40B-215ENST00000551418 GPR20Q99678 358 aa20.69■□□□□ 0.9
PRPF40B-215ENST00000551418 CTSHP09668 335 aa20.68■□□□□ 0.9
PRPF40B-215ENST00000551418 SP4Q02446 784 aa20.68■□□□□ 0.9
PRPF40B-215ENST00000551418 UTP14CQ5TAP6 766 aaKnown RBP20.68■□□□□ 0.9
PRPF40B-215ENST00000551418 MYOCDQ8IZQ8 938 aa20.68■□□□□ 0.9
PRPF40B-215ENST00000551418 LY9Q9HBG7 655 aa20.68■□□□□ 0.9
PRPF40B-215ENST00000551418 CD320Q9NPF0 282 aa20.68■□□□□ 0.9
PRPF40B-215ENST00000551418 MEIS2O14770 477 aa20.67■□□□□ 0.9
PRPF40B-215ENST00000551418 EFCAB14O75071 495 aa20.67■□□□□ 0.9
PRPF40B-215ENST00000551418 CATIPQ7Z7H3 387 aa20.67■□□□□ 0.9
PRPF40B-215ENST00000551418 CMTR1Q8N1G2 835 aaKnown RBP20.67■□□□□ 0.9
PRPF40B-215ENST00000551418 MAP4K1Q92918 833 aa20.67■□□□□ 0.9
PRPF40B-215ENST00000551418 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 NOP56O00567 594 aaKnown RBP20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 PLEKHA8P1O95397 391 aa20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 ADAM17P78536 824 aa20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 HTRA4P83105 476 aaPredicted RBP20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 TRAF1Q13077 416 aa20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 METTL7BQ6UX53 244 aa20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 ZNF654Q8IZM8 581 aa20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 LMCD1Q9NZU5 365 aa20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 INSL6Q9Y581 213 aa20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 RBM8AQ9Y5S9 174 aaKnown RBP20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 EMSYQ7Z589 1322 aa20.66■□□□□ 0.9
PRPF40B-215ENST00000551418 KAT6AQ92794 2004 aa20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 FIBPO43427 364 aa20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 ATP9AO75110 1047 aa20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 UPP2O95045 317 aa20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 AMHP03971 560 aa20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 RXRAP19793 462 aa20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 NEDD9Q14511 834 aa20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 GNPTABQ3T906 1256 aa20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 RAB11FIP4Q86YS3 637 aa20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 SRBD1Q8N5C6 995 aaKnown RBP20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 SP7Q8TDD2 431 aaPredicted RBP20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 USP26Q9BXU7 913 aa20.65■□□□□ 0.9
PRPF40B-215ENST00000551418 MYO7AQ13402 2215 aa20.64■□□□□ 0.89
PRPF40B-215ENST00000551418 hCG_1642624A0A1W2PR95 340 aa20.64■□□□□ 0.89
PRPF40B-215ENST00000551418 SART3Q15020 963 aaKnown RBP20.64■□□□□ 0.89
PRPF40B-215ENST00000551418 FBXO22Q8NEZ5 403 aa20.64■□□□□ 0.89
PRPF40B-215ENST00000551418 SMARCC2Q8TAQ2 1214 aa20.64■□□□□ 0.89
PRPF40B-215ENST00000551418 LMBR1Q8WVP7 490 aa20.64■□□□□ 0.89
PRPF40B-215ENST00000551418 SPZ1Q9BXG8 430 aa20.64■□□□□ 0.89
PRPF40B-215ENST00000551418 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 PRC1O43663 620 aa20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 STAM2O75886 525 aa20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 ARHGAP4P98171 946 aa20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 EPC2Q52LR7 807 aa20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 PCNX4Q63HM2 1172 aa20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 RUFY4Q6ZNE9 571 aa20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 SEPT8Q92599 483 aa20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 TOP1MTQ969P6 601 aa20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 RRP36Q96EU6 259 aaKnown RBP20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 UBE2ZQ9H832 354 aaPredicted RBP20.63■□□□□ 0.89
PRPF40B-215ENST00000551418 CHRNA1P02708 482 aa20.62■□□□□ 0.89
PRPF40B-215ENST00000551418 CTCFLQ8NI51 663 aaPredicted RBP20.62■□□□□ 0.89
PRPF40B-215ENST00000551418 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.62■□□□□ 0.89
PRPF40B-215ENST00000551418 NLRC5Q86WI3 1866 aa20.62■□□□□ 0.89
PRPF40B-215ENST00000551418 GSTTP1A0A1W2PQM5 241 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 PIK3CDO00329 1044 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 SH2B2O14492 632 aaPredicted RBP20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 DDAH1O94760 285 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 ITGB5P18084 799 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 UBE2SQ16763 222 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 FAM26DQ5JW98 314 aa20.61■□□□□ 0.89
PRPF40B-215ENST00000551418 ZBTB10Q96DT7 871 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms