RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 GTF2IRD1Q9UHL9 959 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 UMODL1Q5DID0 1318 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 SZT2Q5T011 3432 aa21.72■■□□□ 1.07
DDX54-208ENST00000551344 H3BRB1 525 aa21.71■■□□□ 1.07
DDX54-208ENST00000551344 PITPNM1O00562 1244 aa21.71■■□□□ 1.07
DDX54-208ENST00000551344 CPLX1O14810 134 aa21.71■■□□□ 1.07
DDX54-208ENST00000551344 ATP9AO75110 1047 aa21.71■■□□□ 1.07
DDX54-208ENST00000551344 BFSP2Q13515 415 aa21.71■■□□□ 1.07
DDX54-208ENST00000551344 GDF6Q6KF10 455 aaPredicted RBP21.71■■□□□ 1.07
DDX54-208ENST00000551344 PSRC1Q6PGN9 363 aaPredicted RBP21.71■■□□□ 1.07
DDX54-208ENST00000551344 CPLX2Q6PUV4 134 aaKnown RBP21.71■■□□□ 1.07
DDX54-208ENST00000551344 TRIM22Q8IYM9 498 aa21.71■■□□□ 1.07
DDX54-208ENST00000551344 GPR20Q99678 358 aa21.71■■□□□ 1.07
DDX54-208ENST00000551344 MXRA8Q9BRK3 442 aa21.71■■□□□ 1.07
DDX54-208ENST00000551344 WNT8AQ9H1J5 351 aa21.71■■□□□ 1.07
DDX54-208ENST00000551344 TUT1Q9H6E5 874 aaKnown RBP21.71■■□□□ 1.07
DDX54-208ENST00000551344 KCNA2P16389 499 aa21.7■■□□□ 1.06
DDX54-208ENST00000551344 SREBF1P36956 1147 aa21.7■■□□□ 1.06
DDX54-208ENST00000551344 SMAD3P84022 425 aaKnown RBP21.7■■□□□ 1.06
DDX54-208ENST00000551344 SSRP1Q08945 709 aaKnown RBP21.7■■□□□ 1.06
DDX54-208ENST00000551344 ZNF365Q70YC5 407 aa21.7■■□□□ 1.06
DDX54-208ENST00000551344 RETREG2Q8NC44 543 aa21.7■■□□□ 1.06
DDX54-208ENST00000551344 BICD2Q8TD16 824 aa21.7■■□□□ 1.06
DDX54-208ENST00000551344 LARP6Q9BRS8 491 aaKnown RBP21.7■■□□□ 1.06
DDX54-208ENST00000551344 SH3GLB2Q9NR46 395 aa21.7■■□□□ 1.06
DDX54-208ENST00000551344 TMEM260Q9NX78 707 aa21.7■■□□□ 1.06
DDX54-208ENST00000551344 FGBP02675 491 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 LGALS2P05162 132 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 ACRP10323 421 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 ANKRD1Q15327 319 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 CEP55Q53EZ4 464 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 JAKMIP3Q5VZ66 844 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 FAM109BQ6ICB4 259 aaPredicted RBP21.69■■□□□ 1.06
DDX54-208ENST00000551344 CCDC155Q8N6L0 562 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 CCDC148Q8NFR7 591 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 CAGE1Q8TC20 777 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 PGBD1Q96JS3 809 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 KCNH7Q9NS40 1196 aa21.69■■□□□ 1.06
DDX54-208ENST00000551344 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.68■■□□□ 1.06
DDX54-208ENST00000551344 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.68■■□□□ 1.06
DDX54-208ENST00000551344 PPFIA3O75145 1194 aa21.68■■□□□ 1.06
DDX54-208ENST00000551344 RASIP1Q5U651 963 aa21.68■■□□□ 1.06
DDX54-208ENST00000551344 REXO1Q8N1G1 1221 aaKnown RBP21.68■■□□□ 1.06
DDX54-208ENST00000551344 SEPT1Q8WYJ6 367 aa21.68■■□□□ 1.06
DDX54-208ENST00000551344 CTAGE1Q96RT6 745 aa21.68■■□□□ 1.06
DDX54-208ENST00000551344 MEIS1O00470 390 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 DEXIO95424 95 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 PFKMP08237 780 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 CYP3A4P08684 503 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 IQCF3P0C7M6 154 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 RFC2P35250 354 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 ZNF76P36508 570 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 ARHGAP4P98171 946 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 STK3Q13188 491 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 NIPA1Q7RTP0 329 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 CYP2W1Q8TAV3 490 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 HERVK_113Q902F9 699 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 SCLYQ96I15 445 aa21.67■■□□□ 1.06
DDX54-208ENST00000551344 SLKQ9H2G2 1235 aaPredicted RBP21.67■■□□□ 1.06
DDX54-208ENST00000551344 MTIF3Q9H2K0 278 aaKnown RBP21.67■■□□□ 1.06
DDX54-208ENST00000551344 ZNF215Q9UL58 517 aaPredicted RBP21.67■■□□□ 1.06
DDX54-208ENST00000551344 SEC24BO95487 1268 aa21.66■■□□□ 1.06
DDX54-208ENST00000551344 SP4Q02446 784 aa21.66■■□□□ 1.06
DDX54-208ENST00000551344 RBL2Q08999 1139 aa21.66■■□□□ 1.06
DDX54-208ENST00000551344 PTK7Q13308 1070 aa21.66■■□□□ 1.06
DDX54-208ENST00000551344 FAM177A1Q8N128 213 aaPredicted RBP21.66■■□□□ 1.06
DDX54-208ENST00000551344 DEFB123Q8N688 67 aa21.66■■□□□ 1.06
DDX54-208ENST00000551344 AFAP1L1Q8TED9 768 aa21.66■■□□□ 1.06
DDX54-208ENST00000551344 CRYGNQ8WXF5 182 aa21.66■■□□□ 1.06
DDX54-208ENST00000551344 VPS54Q9P1Q0 977 aa21.66■■□□□ 1.06
DDX54-208ENST00000551344 NFASCO94856 1347 aa21.65■■□□□ 1.06
DDX54-208ENST00000551344 PFKFB2O60825 505 aa21.65■■□□□ 1.06
DDX54-208ENST00000551344 CDKL5O76039 1030 aa21.65■■□□□ 1.06
DDX54-208ENST00000551344 PARNO95453 639 aaKnown RBP21.65■■□□□ 1.06
DDX54-208ENST00000551344 ARP10275 920 aa21.65■■□□□ 1.06
DDX54-208ENST00000551344 TCF7P36402 384 aaPredicted RBP21.65■■□□□ 1.06
DDX54-208ENST00000551344 UTP14CQ5TAP6 766 aaKnown RBP21.65■■□□□ 1.06
DDX54-208ENST00000551344 PKD2L1Q9P0L9 805 aa21.65■■□□□ 1.06
DDX54-208ENST00000551344 TPCN1Q9ULQ1 816 aa21.65■■□□□ 1.06
DDX54-208ENST00000551344 TELO2Q9Y4R8 837 aa21.65■■□□□ 1.06
DDX54-208ENST00000551344 GSTTP1A0A1W2PQM5 241 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 C17orf102A2RUQ5 167 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 SMIM10L2AP0DMW4 78 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 SMIM10L2BP0DMW5 78 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 GNAT1P11488 350 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 HOXC8P31273 242 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 NLRP5P59047 1200 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 SCRN1Q12765 414 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 VWCEQ96DN2 955 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 SDF4Q9BRK5 362 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 RNPEPQ9H4A4 650 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 AGO4Q9HCK5 861 aaKnown RBP21.64■■□□□ 1.05
DDX54-208ENST00000551344 JPH1Q9HDC5 661 aaPredicted RBP21.64■■□□□ 1.05
DDX54-208ENST00000551344 SLC9A2Q9UBY0 812 aa21.64■■□□□ 1.05
DDX54-208ENST00000551344 ADAMTS3O15072 1205 aa21.63■■□□□ 1.05
DDX54-208ENST00000551344 SELPP16109 830 aa21.63■■□□□ 1.05
DDX54-208ENST00000551344 AK2P54819 239 aa21.63■■□□□ 1.05
DDX54-208ENST00000551344 ZNF200P98182 395 aaPredicted RBP21.63■■□□□ 1.05
DDX54-208ENST00000551344 OTOP2Q7RTS6 562 aa21.63■■□□□ 1.05
DDX54-208ENST00000551344 DHX38Q92620 1227 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms