RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ATP6V0A1Q93050 837 aa14.87□□□□□ -0.03
PTCH1-221ENST00000550914 NECAB3Q96P71 396 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-221ENST00000550914 MAP3K14Q99558 947 aa14.87□□□□□ -0.03
PTCH1-221ENST00000550914 USP26Q9BXU7 913 aa14.87□□□□□ -0.03
PTCH1-221ENST00000550914 TUT1Q9H6E5 874 aaKnown RBP14.87□□□□□ -0.03
PTCH1-221ENST00000550914 INSL6Q9Y581 213 aa14.87□□□□□ -0.03
PTCH1-221ENST00000550914 E7EWF7 191 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 NOP56O00567 594 aaKnown RBP14.86□□□□□ -0.03
PTCH1-221ENST00000550914 AMHP03971 560 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 LGALS2P05162 132 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 CHMLP26374 656 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 PDE4AP27815 886 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 THPOP40225 353 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 PLEKHG4Q58EX7 1191 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 XRRA1Q6P2D8 792 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 METTL7BQ6UX53 244 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 DBF4BQ8NFT6 615 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 GDPD5Q8WTR4 605 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 SUGCTQ9HAC7 445 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 COL4A6Q14031 1691 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 NLRC5Q86WI3 1866 aa14.86□□□□□ -0.03
PTCH1-221ENST00000550914 SPATA31C2B4DYI2 1134 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 FIBPO43427 364 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 SORBS3O60504 671 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 SMIM10L2AP0DMW4 78 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 SMIM10L2BP0DMW5 78 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 GNAT1P11488 350 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 SMARCA1P28370 1054 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 MRPS9P82933 396 aaKnown RBP14.85□□□□□ -0.03
PTCH1-221ENST00000550914 HTRA4P83105 476 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-221ENST00000550914 PTH1RQ03431 593 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-221ENST00000550914 GPKOWQ92917 476 aaPredicted RBP eCLIP14.85□□□□□ -0.03
PTCH1-221ENST00000550914 SENP7Q9BQF6 1050 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 MTA3Q9BTC8 594 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 SPZ1Q9BXG8 430 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 RNPEPQ9H4A4 650 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 SENP2Q9HC62 589 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 MYO7AQ13402 2215 aa14.85□□□□□ -0.03
PTCH1-221ENST00000550914 RALGAPA2Q2PPJ7 1873 aa14.84□□□□□ -0.03
PTCH1-221ENST00000550914 PIK3CDO00329 1044 aa14.84□□□□□ -0.03
PTCH1-221ENST00000550914 SGSM2O43147 1006 aa14.84□□□□□ -0.03
PTCH1-221ENST00000550914 KIF5BP33176 963 aa14.84□□□□□ -0.03
PTCH1-221ENST00000550914 IGDCC4Q8TDY8 1250 aa14.84□□□□□ -0.03
PTCH1-221ENST00000550914 SEPT8Q92599 483 aa14.84□□□□□ -0.03
PTCH1-221ENST00000550914 SAMD11Q96NU1 681 aa14.84□□□□□ -0.03
PTCH1-221ENST00000550914 GPR20Q99678 358 aa14.84□□□□□ -0.03
PTCH1-221ENST00000550914 LZTS2Q9BRK4 669 aa14.84□□□□□ -0.03
PTCH1-221ENST00000550914 RNF216Q9NWF9 866 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-221ENST00000550914 ZNF215Q9UL58 517 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-221ENST00000550914 PIEZO1Q92508 2521 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-221ENST00000550914 TREHO43280 583 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 DDAH1O94760 285 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 ANTXR2P58335 489 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 SEMA3FQ13275 785 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 PCNX4Q63HM2 1172 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTCH1-221ENST00000550914 CYFIP1Q7L576 1253 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 MB21D2Q8IYB1 491 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-221ENST00000550914 MYOCDQ8IZQ8 938 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 GIMAP8Q8ND71 665 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-221ENST00000550914 FBXO22Q8NEZ5 403 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 APBB2Q92870 758 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 MAP4K1Q92918 833 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 CUL5Q93034 780 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 ZFP91Q96JP5 570 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-221ENST00000550914 MTUS1Q9ULD2 1270 aa14.83□□□□□ -0.04
PTCH1-221ENST00000550914 ADAM17P78536 824 aa14.82□□□□□ -0.04
PTCH1-221ENST00000550914 FAM26DQ5JW98 314 aa14.82□□□□□ -0.04
PTCH1-221ENST00000550914 FAM117BQ6P1L5 589 aa14.82□□□□□ -0.04
PTCH1-221ENST00000550914 TMTC2Q8N394 836 aa14.82□□□□□ -0.04
PTCH1-221ENST00000550914 CTCFLQ8NI51 663 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-221ENST00000550914 TOP1MTQ969P6 601 aa14.82□□□□□ -0.04
PTCH1-221ENST00000550914 RRP36Q96EU6 259 aaKnown RBP14.82□□□□□ -0.04
PTCH1-221ENST00000550914 BCAS3Q9H6U6 928 aa14.82□□□□□ -0.04
PTCH1-221ENST00000550914 UBE2ZQ9H832 354 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-221ENST00000550914 TAF6LQ9Y6J9 622 aa14.82□□□□□ -0.04
PTCH1-221ENST00000550914 MEIS2O14770 477 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 HOXD11P31277 338 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-221ENST00000550914 GNAQP50148 359 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 PTPROQ16827 1216 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 RPAINQ86UA6 219 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 NLRX1Q86UT6 975 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 ZNF654Q8IZM8 581 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 SMARCC2Q8TAQ2 1214 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 MRPL38Q96DV4 380 aaKnown RBP14.81□□□□□ -0.04
PTCH1-221ENST00000550914 CDHR1Q96JP9 859 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 YTHDC1Q96MU7 727 aaKnown RBP14.81□□□□□ -0.04
PTCH1-221ENST00000550914 C17orf80Q9BSJ5 609 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 LY9Q9HBG7 655 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 SETD4Q9NVD3 440 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 RTEL1Q9NZ71 1219 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 SEC63Q9UGP8 760 aaKnown RBP14.81□□□□□ -0.04
PTCH1-221ENST00000550914 ARIH1Q9Y4X5 557 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-221ENST00000550914 NRCAMQ92823 1304 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 TTC3P53804 2025 aa14.81□□□□□ -0.04
PTCH1-221ENST00000550914 TRIOO75962 3097 aa14.8□□□□□ -0.04
PTCH1-221ENST00000550914 LEXMQ3ZCV2 418 aa14.8□□□□□ -0.04
PTCH1-221ENST00000550914 EPC2Q52LR7 807 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms