RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 SETQ01105 290 aaPredicted RBP18.43■□□□□ 0.54
CHMP1A-209ENST00000550872 METTL7BQ6UX53 244 aa18.43■□□□□ 0.54
CHMP1A-209ENST00000550872 VTI1AQ96AJ9 217 aa18.43■□□□□ 0.54
CHMP1A-209ENST00000550872 AGO4Q9HCK5 861 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-209ENST00000550872 POLR3EQ9NVU0 708 aa18.43■□□□□ 0.54
CHMP1A-209ENST00000550872 TDP2O95551 362 aa18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 MMP3P08254 477 aa18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 SP4Q02446 784 aa18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 MCTP1Q6DN14 999 aa18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 MOXD1Q6UVY6 613 aa18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 CXCL17Q6UXB2 119 aa18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 PPTC7Q8NI37 304 aa18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 GLT1D1Q96MS3 346 aa18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 UIMC1Q96RL1 719 aa18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 NAP1L4Q99733 375 aaKnown RBP18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 SDF4Q9BRK5 362 aa18.42■□□□□ 0.54
CHMP1A-209ENST00000550872 CYP3A7-CYP3A51PA0A087WV96 503 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 A0A1W2PQ45 241 aaPredicted RBP18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 A0A1W2PQY0 241 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 KIF28PB7ZC32 967 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 NOP56O00567 594 aaKnown RBP18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 CCNT1O60563 726 aaKnown RBP18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 KPNA6O60684 536 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 PDCP20941 246 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 CYP3A7P24462 503 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 ATN1P54259 1190 aaPredicted RBP18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 DGKDQ16760 1214 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 HSDL1Q3SXM5 330 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 Q4G0T1 1027 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 ZNF577Q9BSK1 485 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 STARD7Q9NQZ5 370 aa18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 DDX25Q9UHL0 483 aaKnown RBP18.41■□□□□ 0.54
CHMP1A-209ENST00000550872 DOCK5Q9H7D0 1870 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 IPO5O00410 1097 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 PPFIA4O75335 1185 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 CABYRO75952 493 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 GCFC2P16383 781 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 ATP2B1P20020 1258 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 U2AF2P26368 475 aaKnown RBP eCLIP18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 PURAQ00577 322 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 ITGB3BPQ13352 177 aaPredicted RBP18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 PPP4R3AQ6IN85 833 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 NOSTRINQ8IVI9 506 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 SPRYD3Q8NCJ5 442 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 LENG9Q96B70 501 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 MBOAT7Q96N66 472 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 HTATIP2Q9BUP3 242 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 NFASCO94856 1347 aa18.4■□□□□ 0.54
CHMP1A-209ENST00000550872 DDX39AO00148 427 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 MSH4O15457 936 aa18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 HABP4Q5JVS0 413 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 SLC39A5Q6ZMH5 540 aa18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 GPR20Q99678 358 aa18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 MTG1Q9BT17 334 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 JPH1Q9HDC5 661 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 TBC1D22BQ9NU19 505 aa18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 SLC9A2Q9UBY0 812 aa18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 TELO2Q9Y4R8 837 aa18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 ELP1O95163 1332 aa18.39■□□□□ 0.53
CHMP1A-209ENST00000550872 VPS37CA5D8V6 355 aaPredicted RBP18.38■□□□□ 0.53
CHMP1A-209ENST00000550872 SLC37A4O43826 429 aa18.38■□□□□ 0.53
CHMP1A-209ENST00000550872 BECN1Q14457 450 aa18.38■□□□□ 0.53
CHMP1A-209ENST00000550872 SEPT1Q8WYJ6 367 aa18.38■□□□□ 0.53
CHMP1A-209ENST00000550872 NOL7Q9UMY1 257 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-209ENST00000550872 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 DHX15O43143 795 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 MARCH6O60337 910 aa18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 HOXD8P13378 290 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 SYT1P21579 422 aa18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 CHMP4BP1P59074 171 aa18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 PSMC6P62333 389 aa18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 LRRC26Q2I0M4 334 aa18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 UTP14CQ5TAP6 766 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 DPF3Q92784 378 aa18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 SLC5A5Q92911 643 aa18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 TCEAL9Q9UHQ7 104 aa18.37■□□□□ 0.53
CHMP1A-209ENST00000550872 GSTTP1A0A1W2PQM5 241 aa18.36■□□□□ 0.53
CHMP1A-209ENST00000550872 GAS7O60861 476 aa18.36■□□□□ 0.53
CHMP1A-209ENST00000550872 ZNF286BP0CG31 522 aa18.36■□□□□ 0.53
CHMP1A-209ENST00000550872 TCF7P36402 384 aaPredicted RBP18.36■□□□□ 0.53
CHMP1A-209ENST00000550872 ACTR2P61160 394 aa18.36■□□□□ 0.53
CHMP1A-209ENST00000550872 GJA10Q969M2 543 aa18.36■□□□□ 0.53
CHMP1A-209ENST00000550872 RIT2Q99578 217 aa18.36■□□□□ 0.53
CHMP1A-209ENST00000550872 TEKT3Q9BXF9 490 aa18.36■□□□□ 0.53
CHMP1A-209ENST00000550872 ARVCFO00192 962 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 WNT7AO00755 349 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 CCNE2O96020 404 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 LGALS2P05162 132 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 MCM7P33993 719 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 TRAPPC10P48553 1259 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 RTP1P59025 263 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 ITGA7Q13683 1181 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 ZNF174Q15697 407 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 TTC38Q5R3I4 469 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 LRCH2Q5VUJ6 765 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 POTEDQ86YR6 584 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 ETNPPLQ8TBG4 499 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 KAT2BQ92831 832 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 ATP11BQ9Y2G3 1177 aa18.35■□□□□ 0.53
CHMP1A-209ENST00000550872 EVI5O60447 810 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms