RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 BRMS1Q9HCU9 246 aa15.64■□□□□ 0.09
TROAP-213ENST00000550709 PRDM5Q9NQX1 630 aaPredicted RBP15.64■□□□□ 0.09
TROAP-213ENST00000550709 TNRC18O15417 2968 aaPredicted RBP15.64■□□□□ 0.09
TROAP-213ENST00000550709 GRIN2DO15399 1336 aa15.64■□□□□ 0.09
TROAP-213ENST00000550709 M0R2N6 131 aa15.63■□□□□ 0.09
TROAP-213ENST00000550709 MAFGO15525 162 aa15.63■□□□□ 0.09
TROAP-213ENST00000550709 KRT2P35908 639 aa15.63■□□□□ 0.09
TROAP-213ENST00000550709 NR5A1Q13285 461 aa15.63■□□□□ 0.09
TROAP-213ENST00000550709 NONOQ15233 471 aaKnown RBP eCLIP15.63■□□□□ 0.09
TROAP-213ENST00000550709 INF2Q27J81 1249 aa15.63■□□□□ 0.09
TROAP-213ENST00000550709 NBPF20Q3BBV1 942 aa15.63■□□□□ 0.09
TROAP-213ENST00000550709 FAM47CQ5HY64 1035 aa15.63■□□□□ 0.09
TROAP-213ENST00000550709 UTP14CQ5TAP6 766 aaKnown RBP15.63■□□□□ 0.09
TROAP-213ENST00000550709 PIK3AP1Q6ZUJ8 805 aa15.63■□□□□ 0.09
TROAP-213ENST00000550709 GIMAP8Q8ND71 665 aaPredicted RBP15.63■□□□□ 0.09
TROAP-213ENST00000550709 C8orf76Q96K31 380 aa15.63■□□□□ 0.09
TROAP-213ENST00000550709 AGO4Q9HCK5 861 aaKnown RBP15.63■□□□□ 0.09
TROAP-213ENST00000550709 DCDC2CA8MYV0 355 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 DDX39AO00148 427 aaKnown RBP15.62■□□□□ 0.09
TROAP-213ENST00000550709 EDIL3O43854 480 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 PPFIA4O75335 1185 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 MMP1P03956 469 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 CDK7P50613 346 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 C1orf53Q5VUE5 145 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 NIPA1Q7RTP0 329 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 SH3RF1Q7Z6J0 888 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 KAT2BQ92831 832 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 GPR20Q99678 358 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 SDF4Q9BRK5 362 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 PRKAG2Q9UGJ0 569 aa15.62■□□□□ 0.09
TROAP-213ENST00000550709 IGLV3-22A0A075B6J6 115 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 FAM205CA6NFA0 338 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 BTBD18B2RXH4 712 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 TDP2O95551 362 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 CIITAP33076 1130 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 USP11P51784 963 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 ITGB3BPQ13352 177 aaPredicted RBP15.61■□□□□ 0.09
TROAP-213ENST00000550709 LETM2Q2VYF4 491 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 EARS2Q5JPH6 523 aaKnown RBP15.61■□□□□ 0.09
TROAP-213ENST00000550709 ANKRD33Q7Z3H0 272 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 DIS3L2Q8IYB7 885 aaKnown RBP15.61■□□□□ 0.09
TROAP-213ENST00000550709 SLC43A3Q8NBI5 491 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 ZNF577Q9BSK1 485 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 TRPV6Q9H1D0 765 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 JPH1Q9HDC5 661 aaPredicted RBP15.61■□□□□ 0.09
TROAP-213ENST00000550709 TMEM39AQ9NV64 488 aa15.61■□□□□ 0.09
TROAP-213ENST00000550709 TRIM43BA6NCK2 446 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 IPO5O00410 1097 aaKnown RBP15.6■□□□□ 0.09
TROAP-213ENST00000550709 LGALS2P05162 132 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 CLTBP09497 229 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 HOXD8P13378 290 aaPredicted RBP15.6■□□□□ 0.09
TROAP-213ENST00000550709 PSEN2P49810 448 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 FAAP100Q0VG06 881 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 MFSD10Q14728 455 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 SAFBQ15424 915 aaKnown RBP eCLIP15.6■□□□□ 0.09
TROAP-213ENST00000550709 PRPF38BQ5VTL8 546 aaKnown RBP15.6■□□□□ 0.09
TROAP-213ENST00000550709 TRIM50Q86XT4 487 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 TRIM43Q96BQ3 446 aaPredicted RBP15.6■□□□□ 0.09
TROAP-213ENST00000550709 TOX2Q96NM4 488 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 PDLIM7Q9NR12 457 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 TRMT13Q9NUP7 481 aaKnown RBP15.6■□□□□ 0.09
TROAP-213ENST00000550709 SLC9A2Q9UBY0 812 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 MROH7Q68CQ1 1323 aa15.6■□□□□ 0.09
TROAP-213ENST00000550709 FRMPD3Q5JV73 1810 aa15.59■□□□□ 0.09
TROAP-213ENST00000550709 GSTTP1A0A1W2PQM5 241 aa15.59■□□□□ 0.09
TROAP-213ENST00000550709 TLR3O15455 904 aaKnown RBP15.59■□□□□ 0.09
TROAP-213ENST00000550709 TCF7P36402 384 aaPredicted RBP15.59■□□□□ 0.09
TROAP-213ENST00000550709 SETQ01105 290 aaPredicted RBP15.59■□□□□ 0.09
TROAP-213ENST00000550709 KIAA0753Q2KHM9 967 aa15.59■□□□□ 0.09
TROAP-213ENST00000550709 NEK8Q86SG6 692 aa15.59■□□□□ 0.09
TROAP-213ENST00000550709 FAM126BQ8IXS8 530 aa15.59■□□□□ 0.09
TROAP-213ENST00000550709 SEPT1Q8WYJ6 367 aa15.59■□□□□ 0.09
TROAP-213ENST00000550709 GJA10Q969M2 543 aa15.59■□□□□ 0.09
TROAP-213ENST00000550709 LENG9Q96B70 501 aa15.59■□□□□ 0.09
TROAP-213ENST00000550709 C16orf70Q9BSU1 422 aa15.59■□□□□ 0.09
TROAP-213ENST00000550709 SMC3Q9UQE7 1217 aa15.59■□□□□ 0.09
TROAP-213ENST00000550709 H3BRB1 525 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 MSH4O15457 936 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 B4GALT4O60513 344 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 F2P00734 622 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 ATP2B1P20020 1258 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 GJB2P29033 226 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 ACTR2P61160 394 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 MDM2Q00987 491 aaPredicted RBP15.58■□□□□ 0.08
TROAP-213ENST00000550709 GNL2Q13823 731 aaKnown RBP15.58■□□□□ 0.08
TROAP-213ENST00000550709 NFRKBQ6P4R8 1299 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 C7orf31Q8N865 590 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 FBXO18Q8NFZ0 1043 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 GLG1Q92896 1179 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 TNFRSF25Q93038 417 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 KATNAL1Q9BW62 490 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 TUT1Q9H6E5 874 aaKnown RBP15.58■□□□□ 0.08
TROAP-213ENST00000550709 HDAC6Q9UBN7 1215 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 DDX25Q9UHL0 483 aaKnown RBP15.58■□□□□ 0.08
TROAP-213ENST00000550709 KIF3AQ9Y496 699 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 NFASCO94856 1347 aa15.58■□□□□ 0.08
TROAP-213ENST00000550709 CEP290O15078 2479 aa15.57■□□□□ 0.08
TROAP-213ENST00000550709 CYP3A7-CYP3A51PA0A087WV96 503 aa15.57■□□□□ 0.08
TROAP-213ENST00000550709 DHX15O43143 795 aaKnown RBP15.57■□□□□ 0.08
TROAP-213ENST00000550709 CCNT1O60563 726 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms