RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 MSCO60682 206 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 ARAFP10398 606 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 CNGA1P29973 690 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 ERVK-24P63145 666 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 NUCB2P80303 420 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 ATP2B2Q01814 1243 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 USP17L24Q0WX57 530 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 STK3Q13188 491 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 WTAPQ15007 396 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 PPP2R5BQ15173 497 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 FAM47AQ5JRC9 791 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 APOA5Q6Q788 366 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 SYNE3Q6ZMZ3 975 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 NFXL1Q6ZNB6 911 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 PLEKHH3Q7Z736 793 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 NLRP8Q86W28 1048 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 DGKHQ86XP1 1220 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 CCDC83Q8IWF9 413 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 TDHQ8IZJ6 230 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 ZNF295-AS1Q8N0V1 137 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 DEFB123Q8N688 67 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 ENAHQ8N8S7 591 aaPredicted RBP7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 C1orf216Q8TAB5 229 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 CCDC17Q96LX7 622 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 GDF15Q99988 308 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 ZKSCAN3Q9BRR0 538 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 PRO3102Q9H379 93 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 IL17RBQ9NRM6 502 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 SLC5A4Q9NY91 659 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 KLF15Q9UIH9 416 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 OGDHLQ9ULD0 1010 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 ZMYND8Q9ULU4 1186 aaPredicted RBP7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 SMC3Q9UQE7 1217 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 SLC12A7Q9Y666 1083 aa7.15□□□□□ -1.26
DEPDC4-209ENST00000550587 CENPFP49454 3210 aa7.15□□□□□ -1.27
DEPDC4-209ENST00000550587 PTPRFP10586 1907 aa7.15□□□□□ -1.27
DEPDC4-209ENST00000550587 A6NJY4 79 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 ZBTB43O43298 467 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 TNKSO95271 1327 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 TSPY3P0CV98 308 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 TSPY8P0CW00 308 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 CALM1P0DP23 149 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 CALM2P0DP24 149 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 CALM3P0DP25 149 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 MAPTP10636 758 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 SYN1P17600 705 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 CD33P20138 364 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 SHMT1P34896 483 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 NOVP48745 357 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 CCT2P78371 535 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 ST3GAL1Q11201 340 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 SCRN1Q12765 414 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 RAB3GAP1Q15042 981 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 LRIT3Q3SXY7 679 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 CERKLQ49MI3 558 aaPredicted RBP7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 ARSJQ5FYB0 599 aaPredicted RBP7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 IFIT1BQ5T764 474 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 RCSD1Q6JBY9 416 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 TATDN1Q6P1N9 297 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 GPR142Q7Z601 462 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 SLC44A5Q8NCS7 719 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 SMARCC2Q8TAQ2 1214 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 DIS3LQ8TF46 1054 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 PHIPQ8WWQ0 1821 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 TRIB2Q92519 343 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 APBA2Q99767 749 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 ZBTB21Q9ULJ3 1066 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 RABGAP1Q9Y3P9 1069 aa7.14□□□□□ -1.27
DEPDC4-209ENST00000550587 MYH8P13535 1937 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 ATAD5Q96QE3 1844 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 NID2Q14112 1375 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 CCDC196A0A1B0GTZ2 297 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 SLC15A5A6NIM6 579 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 GOLGA8BA8MQT2 603 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 CDK2AP1O14519 115 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 KHNYNO15037 678 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 NMT2O60551 498 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 CTDNEP1O95476 244 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 GH2P01242 217 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 PDCP20941 246 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 GJB2P29033 226 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 MAGEA10P43363 369 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 METAP2P50579 478 aaKnown RBP eCLIP7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 HMGN5P82970 282 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 TNP2Q05952 138 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 CACNB2Q08289 660 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 TROAPQ12815 778 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 ZYXQ15942 572 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 ABCB5Q2M3G0 1257 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 CATIPQ7Z7H3 387 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 DPP9Q86TI2 863 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 ZNF654Q8IZM8 581 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 FANCBQ8NB91 859 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 ARRDC4Q8NCT1 418 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 MAP3K14Q99558 947 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 HOXC10Q9NYD6 342 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 RBPJLQ9UBG7 517 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 NAP1L2Q9ULW6 460 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 KIF3AQ9Y496 699 aa7.13□□□□□ -1.27
DEPDC4-209ENST00000550587 PCDHGA11Q9Y5H2 935 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms