RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 EPOPA6NHQ4 379 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 SH2B2O14492 632 aaPredicted RBP15.42■□□□□ 0.06
NUP188-211ENST00000550219 GTPBP6O43824 516 aaPredicted RBP15.42■□□□□ 0.06
NUP188-211ENST00000550219 LGALS2P05162 132 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 HOXD8P13378 290 aaPredicted RBP15.42■□□□□ 0.06
NUP188-211ENST00000550219 MRPS9P82933 396 aaKnown RBP15.42■□□□□ 0.06
NUP188-211ENST00000550219 TAP1Q03518 808 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 RBL2Q08999 1139 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 HIC1Q14526 733 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 GPNMBQ14956 572 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 RABEP1Q15276 862 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 TCTN1Q2MV58 587 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 ZNF618Q5T7W0 954 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 USP17L6PQ6QN14 398 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 SPRED2Q7Z698 418 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 CMTR1Q8N1G2 835 aaKnown RBP15.42■□□□□ 0.06
NUP188-211ENST00000550219 ZBED2Q9BTP6 218 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 LRRC2Q9BYS8 371 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 BCAS3Q9H6U6 928 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 CYP46A1Q9Y6A2 500 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 FRMPD4Q14CM0 1322 aa15.42■□□□□ 0.06
NUP188-211ENST00000550219 C17orf102A2RUQ5 167 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 LCHNA4D1U4 455 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 PPFIA4O75335 1185 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 TGFB3P10600 412 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 THPOP40225 353 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 TRIM71Q2Q1W2 868 aaKnown RBP15.41■□□□□ 0.06
NUP188-211ENST00000550219 KRT40Q6A162 431 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 FAM117BQ6P1L5 589 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 CYFIP1Q7L576 1253 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 TRIM50Q86XT4 487 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 ATXN2LQ8WWM7 1075 aaKnown RBP15.41■□□□□ 0.06
NUP188-211ENST00000550219 TMEM87BQ96K49 555 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 INPP4AQ96PE3 977 aaPredicted RBP15.41■□□□□ 0.06
NUP188-211ENST00000550219 C16orf70Q9BSU1 422 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 AGXT2Q9BYV1 514 aa15.41■□□□□ 0.06
NUP188-211ENST00000550219 UPF3BQ9BZI7 483 aaKnown RBP15.41■□□□□ 0.06
NUP188-211ENST00000550219 TSPYL2Q9H2G4 693 aaPredicted RBP15.41■□□□□ 0.06
NUP188-211ENST00000550219 BAZ2BQ9UIF8 2168 aaKnown RBP15.41■□□□□ 0.06
NUP188-211ENST00000550219 A0A0C4DFX4 3053 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 TRIP12Q14669 1992 aaPredicted RBP15.4■□□□□ 0.06
NUP188-211ENST00000550219 TET1Q8NFU7 2136 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 DOCK5Q9H7D0 1870 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 hCG_1642624A0A1W2PR95 340 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 H3BRB1 525 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 FIBPO43427 364 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 PARNO95453 639 aaKnown RBP15.4■□□□□ 0.06
NUP188-211ENST00000550219 CXCL10P02778 98 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 CTSHP09668 335 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 SMIM10L2AP0DMW4 78 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 SMIM10L2BP0DMW5 78 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 CPA1P15085 419 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 SEMA3FQ13275 785 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 UTP14CQ5TAP6 766 aaKnown RBP15.4■□□□□ 0.06
NUP188-211ENST00000550219 MICU3Q86XE3 530 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 SRBD1Q8N5C6 995 aaKnown RBP15.4■□□□□ 0.06
NUP188-211ENST00000550219 ATP6V0A1Q93050 837 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 ASB2Q96Q27 587 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 MAP3K14Q99558 947 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 TUT1Q9H6E5 874 aaKnown RBP15.4■□□□□ 0.06
NUP188-211ENST00000550219 MTUS1Q9ULD2 1270 aa15.4■□□□□ 0.06
NUP188-211ENST00000550219 PRUNE2Q8WUY3 3088 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 CUL9Q8IWT3 2517 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 STAM2O75886 525 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 GNAQP50148 359 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 MRPS5P82675 430 aaKnown RBP15.39■□□□□ 0.05
NUP188-211ENST00000550219 NEDD9Q14511 834 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 MBTPS1Q14703 1052 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 TRAF7Q6Q0C0 670 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 METTL7BQ6UX53 244 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 CCDC82Q8N4S0 544 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 LZTS2Q9BRK4 669 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 PDRG1Q9NUG6 133 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 PKD2L1Q9P0L9 805 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 TELO2Q9Y4R8 837 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 SLC12A7Q9Y666 1083 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 MTCH2Q9Y6C9 303 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 CHD9Q3L8U1 2897 aa15.39■□□□□ 0.05
NUP188-211ENST00000550219 ABHD14A-ACY1A0A1B0GW23 586 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 RSPH10B2B2RC85 870 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 SPATA31C2B4DYI2 1134 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 MEIS2O14770 477 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 TREHO43280 583 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 LGR5O75473 907 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 RSPH10BP0C881 870 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 ICAM3P32942 547 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 LIFRP42702 1097 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 NEK4P51957 841 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 IKBKEQ14164 716 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 UBE2SQ16763 222 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 PCNX4Q63HM2 1172 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 HEATR3Q7Z4Q2 680 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 NLRX1Q86UT6 975 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 SERINC5Q86VE9 423 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 ADAMTS19Q8TE59 1207 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 GDPD5Q8WTR4 605 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 TCEANC2Q96MN5 208 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 GPR20Q99678 358 aa15.38■□□□□ 0.05
NUP188-211ENST00000550219 ZNF215Q9UL58 517 aaPredicted RBP15.38■□□□□ 0.05
NUP188-211ENST00000550219 TNFRSF10AO00220 468 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms