RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 KRT23Q9C075 422 aa7.78□□□□□ -1.16
TMEM116-208ENST00000549537 CPVLQ9H3G5 476 aa7.78□□□□□ -1.16
TMEM116-208ENST00000549537 CNNM2Q9H8M5 875 aa7.78□□□□□ -1.16
TMEM116-208ENST00000549537 IGSF5Q9NSI5 407 aa7.78□□□□□ -1.16
TMEM116-208ENST00000549537 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
TMEM116-208ENST00000549537 ZHX1Q9UKY1 873 aaPredicted RBP7.78□□□□□ -1.16
TMEM116-208ENST00000549537 GNEQ9Y223 722 aaKnown RBP7.78□□□□□ -1.16
TMEM116-208ENST00000549537 TNKSO95271 1327 aa7.78□□□□□ -1.16
TMEM116-208ENST00000549537 WDR19Q8NEZ3 1342 aa7.78□□□□□ -1.16
TMEM116-208ENST00000549537 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.77□□□□□ -1.17
TMEM116-208ENST00000549537 ASB14A6NK59 587 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 FSHRP23945 695 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 ABL2P42684 1182 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 GSK3AP49840 483 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 ACLYP53396 1101 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 GJA9P57773 515 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 PDE4CQ08493 712 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 BAATQ14032 418 aaPredicted RBP7.77□□□□□ -1.17
TMEM116-208ENST00000549537 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 TAPT1Q6NXT6 567 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 NSMFQ6X4W1 530 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 SLC30A10Q6XR72 485 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 STOX1Q6ZVD7 989 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 RNF180Q86T96 592 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 CCDC116Q8IYX3 515 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 GPKOWQ92917 476 aaPredicted RBP eCLIP7.77□□□□□ -1.17
TMEM116-208ENST00000549537 MAP4K1Q92918 833 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 CNTNAP3BQ96NU0 1288 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 C1QTNF2Q9BXJ5 285 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 CNTNAP3Q9BZ76 1288 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 UBA5Q9GZZ9 404 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 PDLIM7Q9NR12 457 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 ATP11BQ9Y2G3 1177 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 BDP1A6H8Y1 2624 aa7.77□□□□□ -1.17
TMEM116-208ENST00000549537 LOC102724159A0A0B4J2E5 919 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 TRIM43BA6NCK2 446 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 BRD1O95696 1058 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 PTGS1P23219 599 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 EDNRBP24530 442 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 ITGB8P26012 769 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 ALDH5A1P51649 535 aaPredicted RBP7.76□□□□□ -1.17
TMEM116-208ENST00000549537 TLE2Q04725 743 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 PWP2Q15269 919 aaKnown RBP7.76□□□□□ -1.17
TMEM116-208ENST00000549537 KCNA10Q16322 511 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 SLC35G1Q2M3R5 365 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 LRIT3Q3SXY7 679 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 ASPRV1Q53RT3 343 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 TMEM63BQ5T3F8 832 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 ANKRD33Q7Z3H0 272 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 SH3RF1Q7Z6J0 888 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 SKAP1Q86WV1 359 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 FBXO16Q8IX29 292 aaPredicted RBP7.76□□□□□ -1.17
TMEM116-208ENST00000549537 ADGRF4Q8IZF3 695 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 TDHQ8IZJ6 230 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 RUFY2Q8WXA3 655 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 TRIM43Q96BQ3 446 aaPredicted RBP7.76□□□□□ -1.17
TMEM116-208ENST00000549537 MTMR8Q96EF0 704 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 UBE2OQ9C0C9 1292 aaKnown RBP7.76□□□□□ -1.17
TMEM116-208ENST00000549537 KAT14Q9H8E8 782 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 JMJD4Q9H9V9 463 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 PDGFCQ9NRA1 345 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 PGPEP1Q9NXJ5 209 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 PNMA2Q9UL42 364 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 ELP1O95163 1332 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 MYO9BQ13459 2157 aa7.76□□□□□ -1.17
TMEM116-208ENST00000549537 RBM47A0AV96 593 aaKnown RBP7.75□□□□□ -1.17
TMEM116-208ENST00000549537 PALM3A6NDB9 673 aaPredicted RBP7.75□□□□□ -1.17
TMEM116-208ENST00000549537 E7EWF7 191 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 OPLAHO14841 1288 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 KIAA0355O15063 1070 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 IGHA1P01876 353 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 ASGR1P07306 291 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 PARP1P09874 1014 aaKnown RBP7.75□□□□□ -1.17
TMEM116-208ENST00000549537 C6orf222P0C671 652 aaPredicted RBP7.75□□□□□ -1.17
TMEM116-208ENST00000549537 CDK7P50613 346 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 ANTXR2P58335 489 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 RPS6P62753 249 aaKnown RBP7.75□□□□□ -1.17
TMEM116-208ENST00000549537 TNFAIP2Q03169 654 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 PTSQ03393 145 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 FAAP100Q0VG06 881 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 COL9A3Q14050 684 aaPredicted RBP7.75□□□□□ -1.17
TMEM116-208ENST00000549537 CDC37Q16543 378 aaPredicted RBP7.75□□□□□ -1.17
TMEM116-208ENST00000549537 IFIT1BQ5T764 474 aaKnown RBP7.75□□□□□ -1.17
TMEM116-208ENST00000549537 MB21D2Q8IYB1 491 aaPredicted RBP7.75□□□□□ -1.17
TMEM116-208ENST00000549537 STAG2Q8N3U4 1231 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 NUP133Q8WUM0 1156 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 TBC1D5Q92609 795 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 TOX2Q96NM4 488 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 UBAC1Q9BSL1 405 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 MAF1Q9H063 256 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 LSG1Q9H089 658 aaKnown RBP7.75□□□□□ -1.17
TMEM116-208ENST00000549537 VTA1Q9NP79 307 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 STARD7Q9NQZ5 370 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 MAD2L2Q9UI95 211 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 Q9Y3F1 56 aa7.75□□□□□ -1.17
TMEM116-208ENST00000549537 MYH6P13533 1939 aa7.74□□□□□ -1.17
TMEM116-208ENST00000549537 PTPDC1A2A3K4 754 aa7.74□□□□□ -1.17
TMEM116-208ENST00000549537 PPP1R11O60927 126 aaPredicted RBP7.74□□□□□ -1.17
TMEM116-208ENST00000549537 CLTBP09497 229 aa7.74□□□□□ -1.17
TMEM116-208ENST00000549537 CALML3P27482 149 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms