RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 CIITAP33076 1130 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 RESTQ13127 1097 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 SNAPC2Q13487 334 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 DAAM2Q86T65 1068 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 CHST13Q8NET6 341 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 CCT6BQ92526 530 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 TSC1Q92574 1164 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 BPIFA3Q9BQP9 254 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 MTFR1LQ9H019 292 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 ANAPC4Q9UJX5 808 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 NOC2LQ9Y3T9 749 aaKnown RBP10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 CAPN9O14815 690 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 P4HBP07237 508 aaKnown RBP10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 PLA2G4BP0C869 781 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 KRT81Q14533 505 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 PDXDC2PQ6P474 469 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 CCDC89Q8N998 374 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 GCNAQ96QF7 691 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 MTIF3Q9H2K0 278 aaKnown RBP10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 PPME1Q9Y570 386 aa10.09□□□□□ -0.79
PPFIA2-216ENST00000549396 EFNA5P52803 228 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 DIXDC1Q155Q3 683 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 NBPF11Q86T75 865 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 LINC00116Q8NCU8 138 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 NUB1Q9Y5A7 615 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 PDIA5Q14554 519 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 NSUN4Q96CB9 384 aaKnown RBP10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 CNOT6LQ96LI5 555 aaKnown RBP10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 MMP19Q99542 508 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 RPF1Q9H9Y2 349 aaKnown RBP10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 SAMD15Q9P1V8 674 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 SCINQ9Y6U3 715 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 GIPC1O14908 333 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 PRKAB2O43741 272 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 MTMR1Q13613 665 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 BLZF1Q9H2G9 400 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 SUGCTQ9HAC7 445 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 DISC1Q9NRI5 854 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 ZHX1Q9UKY1 873 aaPredicted RBP10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 KNDC1Q76NI1 1749 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 SALL1Q9NSC2 1324 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 CTNND1O60716 968 aaKnown RBP10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 OATP04181 439 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 ATG9AQ7Z3C6 839 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 GINS2Q9Y248 185 aa10.08□□□□□ -0.8
PPFIA2-216ENST00000549396 NR2F2P24468 414 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 BRD3Q15059 726 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 EPHA10Q5JZY3 1008 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 SYT10Q6XYQ8 523 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 SEPT14Q6ZU15 432 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 CCDC63Q8NA47 563 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 GSDMBQ8TAX9 411 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 TRERF1Q96PN7 1200 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 GOLGA8QA0A0J9YX86 632 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 GOLGA8OA6NCC3 632 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 GOLGA8NF8WBI6 632 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 CETPP11597 493 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 KARSQ15046 597 aaKnown RBP10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 EPHA7Q15375 998 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 MAP7D1Q3KQU3 841 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 RESP18Q5W5W9 173 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 C16orf86Q6ZW13 317 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 THEM5Q8N1Q8 247 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 URGCPQ8TCY9 931 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 HVCN1Q96D96 273 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 RNF146Q9NTX7 359 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 COL5A2P05997 1499 aaPredicted RBP10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 ESYT2A0FGR8 921 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 GMNNO75496 209 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 TBXAS1P24557 533 aaPredicted RBP10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 PSMC5P62195 406 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 PPP1R9BQ96SB3 815 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 EDEM3Q9BZQ6 932 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 CLIC4Q9Y696 253 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 GAS2O43903 313 aaKnown RBP10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 GTF2F1P35269 517 aaKnown RBP eCLIP10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 ADCK5Q3MIX3 580 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 FAM76AQ8TAV0 307 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 MORC4Q8TE76 937 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 U2AF1L4Q8WU68 220 aaKnown RBP10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 RSAD2Q8WXG1 361 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 TUBGCP2Q9BSJ2 902 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 EHD4Q9H223 541 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 LY9Q9HBG7 655 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 EMILIN3Q9NT22 766 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 BCAP29Q9UHQ4 241 aa10.07□□□□□ -0.8
PPFIA2-216ENST00000549396 CARNS1A5YM72 827 aa10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 A6NJR5 290 aa10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 COG2Q14746 738 aa10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 HSP90AA4PQ58FG1 418 aa10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 MUM1L1Q5H9M0 696 aa10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 MAEAQ7L5Y9 396 aa10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 EXOC4Q96A65 974 aa10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 ZFYVE28Q9HCC9 887 aa10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 SAR1BQ9Y6B6 198 aa10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 ZHX2Q9Y6X8 837 aa10.06□□□□□ -0.8
PPFIA2-216ENST00000549396 GSG1L2A8MUP6 293 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms