RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 PKN1Q16512 942 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 CDC37Q16543 378 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 MYSM1Q5VVJ2 828 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 SPATA33Q96N06 139 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 C16orf70Q9BSU1 422 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 C11orf84Q9BUA3 381 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 MAF1Q9H063 256 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 LMAN2LQ9H0V9 348 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 DCTPP1Q9H773 170 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 CD207Q9UJ71 328 aa12.63□□□□□ -0.39
TRAFD1-206ENST00000549358 TTC41PQ6P2S7 1318 aa12.62□□□□□ -0.39
TRAFD1-206ENST00000549358 HOXD8P13378 290 aaPredicted RBP12.62□□□□□ -0.39
TRAFD1-206ENST00000549358 ADAM15Q13444 863 aa12.62□□□□□ -0.39
TRAFD1-206ENST00000549358 CELF3Q5SZQ8 465 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-206ENST00000549358 GPATCH4Q5T3I0 446 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-206ENST00000549358 PI4K2BQ8TCG2 481 aa12.62□□□□□ -0.39
TRAFD1-206ENST00000549358 PXMP2Q9NR77 195 aa12.62□□□□□ -0.39
TRAFD1-206ENST00000549358 BRWD1Q9NSI6 2320 aa12.62□□□□□ -0.39
TRAFD1-206ENST00000549358 H3BRB1 525 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 GGPS1O95749 300 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 CFBP00751 764 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 FGAP02671 866 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 LINC00271P0C7V0 271 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 SMIM10L2AP0DMW4 78 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 SMIM10L2BP0DMW5 78 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 HSPD1P10809 573 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 MYCLP12524 364 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 NDUFV1P49821 464 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 ZXDAP98168 799 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 SP2Q02086 613 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 ALX1Q15699 326 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 ADGRF4Q8IZF3 695 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 FBXL6Q8N531 539 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 OTUD7AQ8TE49 926 aaPredicted RBP12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 APBB2Q92870 758 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 ZKSCAN3Q9BRR0 538 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 RNPEPQ9H4A4 650 aa12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 TUT1Q9H6E5 874 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 ALG13Q9NP73 1137 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 MRPL11Q9Y3B7 192 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-206ENST00000549358 DHX16O60231 1041 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 RGS20O76081 388 aa12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 HAND2P61296 217 aa12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 KCNV1Q6PIU1 500 aa12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 ATOH1Q92858 354 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 MSLNLQ96KJ4 702 aa12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 DCBLD2Q96PD2 775 aa12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 MLXIPQ9HAP2 919 aa12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 VAT1LQ9HCJ6 419 aa12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 RWDD3Q9Y3V2 267 aa12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 COL4A6Q14031 1691 aa12.6□□□□□ -0.39
TRAFD1-206ENST00000549358 LOC730098B7Z3J9 87 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 CAND2O75155 1236 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 EYA4O95677 639 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 MMP1P03956 469 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 HOXC8P31273 242 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 FOXK2Q01167 660 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 CAMK1Q14012 370 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 BTG3Q14201 252 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 QRICH1Q2TAL8 776 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 C20orf194Q5TEA3 1177 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 MFSD6Q6ZSS7 791 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 MIER1Q8N108 512 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 CLP1Q92989 425 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 PDCD2LQ9BRP1 358 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 BCAS3Q9H6U6 928 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 SETD4Q9NVD3 440 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 CLEC1BQ9P126 229 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 PLAGL2Q9UPG8 496 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 CFAP54Q96N23 3096 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 ADGRA3Q8IWK6 1321 aa12.59□□□□□ -0.39
TRAFD1-206ENST00000549358 LGALS2P05162 132 aa12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 GNAT1P11488 350 aa12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 UBA1P22314 1058 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 VCPP55072 806 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 RRP1P56182 461 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 MICAL3Q7RTP6 2002 aa12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 ADGRD2Q7Z7M1 963 aa12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 VSIG10LQ86VR7 867 aa12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 DGKHQ86XP1 1220 aa12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 PNMA1Q8ND90 353 aa12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 JMJD4Q9H9V9 463 aa12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 HELLSQ9NRZ9 838 aa12.58□□□□□ -0.4
TRAFD1-206ENST00000549358 ZNF318Q5VUA4 2279 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 H0Y858 1186 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 NOP56O00567 594 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 ENPP3O14638 875 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 GALR2O43603 387 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 CHRNA1P02708 482 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 TGFB3P10600 412 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 GHRP10912 638 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 DNAJB1P25685 340 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 AVPR2P30518 371 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 HOXA13P31271 388 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 HSD17B4P51659 736 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 SIGLEC14Q08ET2 396 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 COASYQ13057 564 aa12.57□□□□□ -0.4
TRAFD1-206ENST00000549358 CBX2Q14781 532 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms