RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 MYO7AQ13402 2215 aa18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 CCDC196A0A1B0GTZ2 297 aa18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 OPLAHO14841 1288 aa18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 TOB2Q14106 344 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 CCDC82Q8N4S0 544 aa18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 PIBF1Q8WXW3 757 aa18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 UPF3BQ9BZI7 483 aaKnown RBP18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 SUGCTQ9HAC7 445 aa18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 PDRG1Q9NUG6 133 aa18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 NAP1L2Q9ULW6 460 aaPredicted RBP18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 GTF3C3Q9Y5Q9 886 aa18.11■□□□□ 0.49
CHMP1A-206ENST00000549139 ZNF318Q5VUA4 2279 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 NID2Q14112 1375 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 B4DLN1 442 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 CFBP00751 764 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 CDC27P30260 824 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 METAP2P50579 478 aaKnown RBP eCLIP18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 HSD17B4P51659 736 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 MRPL12P52815 198 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 DEFB103AP81534 67 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 FUT2Q10981 343 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 TCTN1Q2MV58 587 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 FAM178BQ8IXR5 827 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 CAGE1Q8TC20 777 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 SYTL5Q8TDW5 730 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 AFAP1L1Q8TED9 768 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 SCFD2Q8WU76 684 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 MPHOSPH6Q99547 160 aaKnown RBP18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 UBE2ZQ9H832 354 aaPredicted RBP18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 WDFY4Q6ZS81 3184 aa18.1■□□□□ 0.49
CHMP1A-206ENST00000549139 PRR33A8MZF0 331 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 ARIH2O95376 493 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 CXCL10P02778 98 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 PDIA3P30101 505 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 ADD1P35611 737 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 KCNJ6P48051 423 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 ERVK-21P61565 698 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 RBL2Q08999 1139 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 PTGISQ16647 500 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 LEXMQ3ZCV2 418 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 ALYREFQ86V81 257 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 SESTD1Q86VW0 696 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 DHX38Q92620 1227 aaKnown RBP18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 ZNF274Q96GC6 653 aaPredicted RBP18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 TAAR1Q96RJ0 339 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 SIP14410 1827 aa18.09■□□□□ 0.49
CHMP1A-206ENST00000549139 CNTNAP5Q8WYK1 1306 aa18.08■□□□□ 0.49
CHMP1A-206ENST00000549139 GJB5O95377 273 aa18.08■□□□□ 0.48
CHMP1A-206ENST00000549139 GDF6Q6KF10 455 aaPredicted RBP18.08■□□□□ 0.48
CHMP1A-206ENST00000549139 GJD3Q8N144 294 aa18.08■□□□□ 0.48
CHMP1A-206ENST00000549139 NSUN6Q8TEA1 469 aaKnown RBP18.08■□□□□ 0.48
CHMP1A-206ENST00000549139 COL20A1Q9P218 1284 aa18.08■□□□□ 0.48
CHMP1A-206ENST00000549139 NOD1Q9Y239 953 aa18.08■□□□□ 0.48
CHMP1A-206ENST00000549139 TRIOO75962 3097 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 LINC01553A4QN01 128 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 GCOM1H8Y6P7 765 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 NBNO60934 754 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 POLR2MP0CAP2 368 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 TXNP10599 105 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 SELPP16109 830 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 PDE4DQ08499 809 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 CCDC62Q6P9F0 684 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 CNKSR3Q6P9H4 555 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 LRRC8DQ7L1W4 858 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 KAT2BQ92831 832 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 TGS1Q96RS0 853 aaKnown RBP18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 IWS1Q96ST2 819 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 RAD9AQ99638 391 aa18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 V9GY48 417 aaPredicted RBP18.07■□□□□ 0.48
CHMP1A-206ENST00000549139 MYH7BA7E2Y1 1941 aa18.06■□□□□ 0.48
CHMP1A-206ENST00000549139 hCG_1642624A0A1W2PR95 340 aa18.06■□□□□ 0.48
CHMP1A-206ENST00000549139 RBAK-RBAKDNI3L0D1 243 aa18.06■□□□□ 0.48
CHMP1A-206ENST00000549139 IL9P15248 144 aa18.06■□□□□ 0.48
CHMP1A-206ENST00000549139 CCDC155Q8N6L0 562 aa18.06■□□□□ 0.48
CHMP1A-206ENST00000549139 RMDN3Q96TC7 470 aa18.06■□□□□ 0.48
CHMP1A-206ENST00000549139 ZBED2Q9BTP6 218 aa18.06■□□□□ 0.48
CHMP1A-206ENST00000549139 MTUS1Q9ULD2 1270 aa18.06■□□□□ 0.48
CHMP1A-206ENST00000549139 hCG_1984214I3L0E3 225 aa18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 PARNO95453 639 aaKnown RBP18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 MMP3P08254 477 aa18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 KCNA5P22460 613 aa18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 ANKRD1Q15327 319 aa18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 NTRK3Q16288 839 aa18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 ARHGEF16Q5VV41 709 aa18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 TRAF7Q6Q0C0 670 aa18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 ZNF713Q8N859 430 aaPredicted RBP18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 AFG1LQ8WV93 481 aa18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 PXMP2Q9NR77 195 aa18.05■□□□□ 0.48
CHMP1A-206ENST00000549139 ABHD14A-ACY1A0A1B0GW23 586 aa18.04■□□□□ 0.48
CHMP1A-206ENST00000549139 PIK3CDO00329 1044 aa18.04■□□□□ 0.48
CHMP1A-206ENST00000549139 PRPF3O43395 683 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-206ENST00000549139 CKBP12277 381 aa18.04■□□□□ 0.48
CHMP1A-206ENST00000549139 HOXA13P31271 388 aaPredicted RBP18.04■□□□□ 0.48
CHMP1A-206ENST00000549139 CCT2P78371 535 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-206ENST00000549139 MKRN4PQ13434 485 aaPredicted RBP18.04■□□□□ 0.48
CHMP1A-206ENST00000549139 CUL5Q93034 780 aa18.04■□□□□ 0.48
CHMP1A-206ENST00000549139 LARP6Q9BRS8 491 aaKnown RBP18.04■□□□□ 0.48
CHMP1A-206ENST00000549139 MICAL3Q7RTP6 2002 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms