RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 EPB41L2O43491 1005 aaKnown RBP16.83■□□□□ 0.28
LINC00661-203ENST00000549131 RFC2P35250 354 aa16.83■□□□□ 0.28
LINC00661-203ENST00000549131 MTMR1Q13613 665 aa16.83■□□□□ 0.28
LINC00661-203ENST00000549131 AFAP1L1Q8TED9 768 aa16.83■□□□□ 0.28
LINC00661-203ENST00000549131 CDHR1Q96JP9 859 aa16.83■□□□□ 0.28
LINC00661-203ENST00000549131 GPR20Q99678 358 aa16.83■□□□□ 0.28
LINC00661-203ENST00000549131 C16orf70Q9BSU1 422 aa16.83■□□□□ 0.28
LINC00661-203ENST00000549131 TTYH1Q9H313 450 aaPredicted RBP16.83■□□□□ 0.28
LINC00661-203ENST00000549131 STXBP5LQ9Y2K9 1186 aa16.83■□□□□ 0.28
LINC00661-203ENST00000549131 TMEM265A0A087WTH1 108 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 SMCO2A6NFE2 343 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 H3BRB1 525 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 IQCF3P0C7M6 154 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 SCG2P13521 617 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 ITGB5P18084 799 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 PFKFB3Q16875 520 aaPredicted RBP16.82■□□□□ 0.28
LINC00661-203ENST00000549131 RUFY3Q7L099 469 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 TRIM50Q86XT4 487 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 FBXL16Q8N461 479 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 GIMAP8Q8ND71 665 aaPredicted RBP16.82■□□□□ 0.28
LINC00661-203ENST00000549131 DHX38Q92620 1227 aaKnown RBP16.82■□□□□ 0.28
LINC00661-203ENST00000549131 TIFAQ96CG3 184 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 SENP7Q9BQF6 1050 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 USP26Q9BXU7 913 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 ANO3Q9BYT9 981 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 AGXT2Q9BYV1 514 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 FTOQ9C0B1 505 aaKnown RBP eCLIP16.82■□□□□ 0.28
LINC00661-203ENST00000549131 TUT1Q9H6E5 874 aaKnown RBP16.82■□□□□ 0.28
LINC00661-203ENST00000549131 ZNF215Q9UL58 517 aaPredicted RBP16.82■□□□□ 0.28
LINC00661-203ENST00000549131 CYP46A1Q9Y6A2 500 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 SIP14410 1827 aa16.82■□□□□ 0.28
LINC00661-203ENST00000549131 MYO9BQ13459 2157 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 MICAL3Q7RTP6 2002 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 PPFIA3O75145 1194 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 SMIM10L2AP0DMW4 78 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 SMIM10L2BP0DMW5 78 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 ACTN1P12814 892 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 PBX2P40425 430 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 ZNF200P98182 395 aaPredicted RBP16.81■□□□□ 0.28
LINC00661-203ENST00000549131 AKAP17AQ02040 695 aaKnown RBP16.81■□□□□ 0.28
LINC00661-203ENST00000549131 AP3B2Q13367 1082 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 UTP14CQ5TAP6 766 aaKnown RBP16.81■□□□□ 0.28
LINC00661-203ENST00000549131 LRRC8DQ7L1W4 858 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 PHKBQ93100 1093 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 VWCEQ96DN2 955 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 PBX4Q9BYU1 374 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 UPF3BQ9BZI7 483 aaKnown RBP16.81■□□□□ 0.28
LINC00661-203ENST00000549131 GLT8D2Q9H1C3 349 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 SEMA6BQ9H3T3 888 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 TMEM260Q9NX78 707 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 TELO2Q9Y4R8 837 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 UBIAD1Q9Y5Z9 338 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 SLC4A7Q9Y6M7 1214 aa16.81■□□□□ 0.28
LINC00661-203ENST00000549131 CHD9Q3L8U1 2897 aa16.8■□□□□ 0.28
LINC00661-203ENST00000549131 C17orf102A2RUQ5 167 aa16.8■□□□□ 0.28
LINC00661-203ENST00000549131 FOSP01100 380 aaPredicted RBP16.8■□□□□ 0.28
LINC00661-203ENST00000549131 SELPP16109 830 aa16.8■□□□□ 0.28
LINC00661-203ENST00000549131 KCNA2P16389 499 aa16.8■□□□□ 0.28
LINC00661-203ENST00000549131 TCF7P36402 384 aaPredicted RBP16.8■□□□□ 0.28
LINC00661-203ENST00000549131 CCT2P78371 535 aaKnown RBP16.8■□□□□ 0.28
LINC00661-203ENST00000549131 PTK7Q13308 1070 aa16.8■□□□□ 0.28
LINC00661-203ENST00000549131 TOB2Q14106 344 aaPredicted RBP16.8■□□□□ 0.28
LINC00661-203ENST00000549131 RAB30Q15771 203 aa16.8■□□□□ 0.28
LINC00661-203ENST00000549131 TEX2Q8IWB9 1127 aa16.8■□□□□ 0.28
LINC00661-203ENST00000549131 CCDC12Q8WUD4 166 aaPredicted RBP16.8■□□□□ 0.28
LINC00661-203ENST00000549131 CDX2Q99626 313 aaPredicted RBP16.8■□□□□ 0.28
LINC00661-203ENST00000549131 NCOA5Q9HCD5 579 aaKnown RBP16.8■□□□□ 0.28
LINC00661-203ENST00000549131 ZSWIM6Q9HCJ5 1215 aa16.8■□□□□ 0.28
LINC00661-203ENST00000549131 WDR81Q562E7 1941 aa16.8■□□□□ 0.28
LINC00661-203ENST00000549131 EYSQ5T1H1 3165 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 ATP9AO75110 1047 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 CKBP12277 381 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 RBL2Q08999 1139 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 HIC1Q14526 733 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 MYLIPQ8WY64 445 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 ATP6V0A1Q93050 837 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 WNT8BQ93098 351 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 SLC26A6Q9BXS9 759 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 JADE2Q9NQC1 790 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 MSRAQ9UJ68 235 aa16.79■□□□□ 0.28
LINC00661-203ENST00000549131 MYH9P35579 1960 aaKnown RBP16.78■□□□□ 0.28
LINC00661-203ENST00000549131 PRPF3O43395 683 aaKnown RBP16.78■□□□□ 0.28
LINC00661-203ENST00000549131 ATP2A2P16615 1042 aaKnown RBP16.78■□□□□ 0.28
LINC00661-203ENST00000549131 PDIA3P30101 505 aaKnown RBP16.78■□□□□ 0.28
LINC00661-203ENST00000549131 SREBF1P36956 1147 aa16.78■□□□□ 0.28
LINC00661-203ENST00000549131 CLK2P49760 499 aaKnown RBP16.78■□□□□ 0.28
LINC00661-203ENST00000549131 JAKMIP3Q5VZ66 844 aa16.78■□□□□ 0.28
LINC00661-203ENST00000549131 REXO1Q8N1G1 1221 aaKnown RBP16.78■□□□□ 0.28
LINC00661-203ENST00000549131 MXRA8Q9BRK3 442 aa16.78■□□□□ 0.28
LINC00661-203ENST00000549131 RNF26Q9BY78 433 aaPredicted RBP16.78■□□□□ 0.28
LINC00661-203ENST00000549131 ZNF576Q9H609 170 aa16.78■□□□□ 0.28
LINC00661-203ENST00000549131 C6orf50Q9HD87 102 aa16.78■□□□□ 0.28
LINC00661-203ENST00000549131 JPH1Q9HDC5 661 aaPredicted RBP16.78■□□□□ 0.28
LINC00661-203ENST00000549131 KCNH7Q9NS40 1196 aa16.78■□□□□ 0.28
LINC00661-203ENST00000549131 LOXHD1Q8IVV2 1947 aa16.77■□□□□ 0.28
LINC00661-203ENST00000549131 ESYT2A0FGR8 921 aa16.77■□□□□ 0.28
LINC00661-203ENST00000549131 FOSL2P15408 326 aa16.77■□□□□ 0.28
LINC00661-203ENST00000549131 ZNF76P36508 570 aa16.77■□□□□ 0.28
LINC00661-203ENST00000549131 RABGGTBP53611 331 aa16.77■□□□□ 0.28
LINC00661-203ENST00000549131 EVCP57679 992 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms