RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 USP26Q9BXU7 913 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 TUT1Q9H6E5 874 aaKnown RBP14.87□□□□□ -0.03
PTCH1-218ENST00000548945 INSL6Q9Y581 213 aa14.87□□□□□ -0.03
PTCH1-218ENST00000548945 E7EWF7 191 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 NOP56O00567 594 aaKnown RBP14.86□□□□□ -0.03
PTCH1-218ENST00000548945 AMHP03971 560 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 LGALS2P05162 132 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 CHMLP26374 656 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 PDE4AP27815 886 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 THPOP40225 353 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 PLEKHG4Q58EX7 1191 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 XRRA1Q6P2D8 792 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 METTL7BQ6UX53 244 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 DBF4BQ8NFT6 615 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 GDPD5Q8WTR4 605 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 SUGCTQ9HAC7 445 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 COL4A6Q14031 1691 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 NLRC5Q86WI3 1866 aa14.86□□□□□ -0.03
PTCH1-218ENST00000548945 SPATA31C2B4DYI2 1134 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 FIBPO43427 364 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 SORBS3O60504 671 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 SMIM10L2AP0DMW4 78 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 SMIM10L2BP0DMW5 78 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 GNAT1P11488 350 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 SMARCA1P28370 1054 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 MRPS9P82933 396 aaKnown RBP14.85□□□□□ -0.03
PTCH1-218ENST00000548945 HTRA4P83105 476 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-218ENST00000548945 PTH1RQ03431 593 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-218ENST00000548945 GPKOWQ92917 476 aaPredicted RBP eCLIP14.85□□□□□ -0.03
PTCH1-218ENST00000548945 SENP7Q9BQF6 1050 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 MTA3Q9BTC8 594 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 SPZ1Q9BXG8 430 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 RNPEPQ9H4A4 650 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 SENP2Q9HC62 589 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 MYO7AQ13402 2215 aa14.85□□□□□ -0.03
PTCH1-218ENST00000548945 RALGAPA2Q2PPJ7 1873 aa14.84□□□□□ -0.03
PTCH1-218ENST00000548945 PIK3CDO00329 1044 aa14.84□□□□□ -0.03
PTCH1-218ENST00000548945 SGSM2O43147 1006 aa14.84□□□□□ -0.03
PTCH1-218ENST00000548945 KIF5BP33176 963 aa14.84□□□□□ -0.03
PTCH1-218ENST00000548945 IGDCC4Q8TDY8 1250 aa14.84□□□□□ -0.03
PTCH1-218ENST00000548945 SEPT8Q92599 483 aa14.84□□□□□ -0.03
PTCH1-218ENST00000548945 SAMD11Q96NU1 681 aa14.84□□□□□ -0.03
PTCH1-218ENST00000548945 GPR20Q99678 358 aa14.84□□□□□ -0.03
PTCH1-218ENST00000548945 LZTS2Q9BRK4 669 aa14.84□□□□□ -0.03
PTCH1-218ENST00000548945 ZNF215Q9UL58 517 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-218ENST00000548945 PIEZO1Q92508 2521 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-218ENST00000548945 TREHO43280 583 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 DDAH1O94760 285 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 ANTXR2P58335 489 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 SEMA3FQ13275 785 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 PCNX4Q63HM2 1172 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTCH1-218ENST00000548945 CYFIP1Q7L576 1253 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 MB21D2Q8IYB1 491 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-218ENST00000548945 MYOCDQ8IZQ8 938 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 GIMAP8Q8ND71 665 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-218ENST00000548945 FBXO22Q8NEZ5 403 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 APBB2Q92870 758 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 MAP4K1Q92918 833 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 CUL5Q93034 780 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 ZFP91Q96JP5 570 aaPredicted RBP14.83□□□□□ -0.04
PTCH1-218ENST00000548945 MTUS1Q9ULD2 1270 aa14.83□□□□□ -0.04
PTCH1-218ENST00000548945 ADAM17P78536 824 aa14.82□□□□□ -0.04
PTCH1-218ENST00000548945 FAM26DQ5JW98 314 aa14.82□□□□□ -0.04
PTCH1-218ENST00000548945 FAM117BQ6P1L5 589 aa14.82□□□□□ -0.04
PTCH1-218ENST00000548945 TMTC2Q8N394 836 aa14.82□□□□□ -0.04
PTCH1-218ENST00000548945 CTCFLQ8NI51 663 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-218ENST00000548945 TOP1MTQ969P6 601 aa14.82□□□□□ -0.04
PTCH1-218ENST00000548945 RRP36Q96EU6 259 aaKnown RBP14.82□□□□□ -0.04
PTCH1-218ENST00000548945 BCAS3Q9H6U6 928 aa14.82□□□□□ -0.04
PTCH1-218ENST00000548945 UBE2ZQ9H832 354 aaPredicted RBP14.82□□□□□ -0.04
PTCH1-218ENST00000548945 TAF6LQ9Y6J9 622 aa14.82□□□□□ -0.04
PTCH1-218ENST00000548945 MEIS2O14770 477 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 GNAQP50148 359 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 PTPROQ16827 1216 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 RPAINQ86UA6 219 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 NLRX1Q86UT6 975 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 ZNF654Q8IZM8 581 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 SMARCC2Q8TAQ2 1214 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 MRPL38Q96DV4 380 aaKnown RBP14.81□□□□□ -0.04
PTCH1-218ENST00000548945 CDHR1Q96JP9 859 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 C17orf80Q9BSJ5 609 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 LY9Q9HBG7 655 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 SETD4Q9NVD3 440 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 RTEL1Q9NZ71 1219 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 SEC63Q9UGP8 760 aaKnown RBP14.81□□□□□ -0.04
PTCH1-218ENST00000548945 ARIH1Q9Y4X5 557 aaPredicted RBP14.81□□□□□ -0.04
PTCH1-218ENST00000548945 NRCAMQ92823 1304 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 TTC3P53804 2025 aa14.81□□□□□ -0.04
PTCH1-218ENST00000548945 TRIOO75962 3097 aa14.8□□□□□ -0.04
PTCH1-218ENST00000548945 LEXMQ3ZCV2 418 aa14.8□□□□□ -0.04
PTCH1-218ENST00000548945 EPC2Q52LR7 807 aa14.8□□□□□ -0.04
PTCH1-218ENST00000548945 USP17L6PQ6QN14 398 aa14.8□□□□□ -0.04
PTCH1-218ENST00000548945 LMBR1Q8WVP7 490 aa14.8□□□□□ -0.04
PTCH1-218ENST00000548945 GPRASP2Q96D09 838 aa14.8□□□□□ -0.04
PTCH1-218ENST00000548945 YME1L1Q96TA2 773 aa14.8□□□□□ -0.04
PTCH1-218ENST00000548945 MUC6Q6W4X9 2439 aa14.8□□□□□ -0.04
PTCH1-218ENST00000548945 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms