RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 GRIA2P42262 883 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 PPP2CBP62714 309 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 PPP2R2AP63151 447 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 PPP2CAP67775 309 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 MAP4K2Q12851 820 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 GNL2Q13823 731 aaKnown RBP6.61□□□□□ -1.35
CNOT2-216ENST00000548939 ICAM4Q14773 271 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 SLC10A6Q3KNW5 377 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 CYP4F22Q6NT55 531 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 CIR1Q86X95 450 aaPredicted RBP6.61□□□□□ -1.35
CNOT2-216ENST00000548939 TRIM48Q8IWZ4 208 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 KLHL36Q8N4N3 616 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 SH3RF3Q8TEJ3 882 aaPredicted RBP6.61□□□□□ -1.35
CNOT2-216ENST00000548939 CDIP1Q9H305 208 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 BARX1Q9HBU1 254 aaPredicted RBP6.61□□□□□ -1.35
CNOT2-216ENST00000548939 SLC6A20Q9NP91 592 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 GPR27Q9NS67 375 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 ASH2LQ9UBL3 628 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 SRRDQ9UH36 339 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 WASF3Q9UPY6 502 aa6.61□□□□□ -1.35
CNOT2-216ENST00000548939 EPHB4P54760 987 aa6.6□□□□□ -1.35
CNOT2-216ENST00000548939 SPRED1Q7Z699 444 aa6.6□□□□□ -1.35
CNOT2-216ENST00000548939 SLC16A11Q8NCK7 471 aa6.6□□□□□ -1.35
CNOT2-216ENST00000548939 PIP4K2CQ8TBX8 421 aa6.6□□□□□ -1.35
CNOT2-216ENST00000548939 IER2Q9BTL4 223 aa6.6□□□□□ -1.35
CNOT2-216ENST00000548939 JAM3Q9BX67 310 aa6.6□□□□□ -1.35
CNOT2-216ENST00000548939 HSPBP1Q9NZL4 362 aa6.6□□□□□ -1.35
CNOT2-216ENST00000548939 RBPJLQ9UBG7 517 aa6.6□□□□□ -1.35
CNOT2-216ENST00000548939 ZDHHC9Q9Y397 364 aa6.6□□□□□ -1.35
CNOT2-216ENST00000548939 TSC22D4Q9Y3Q8 395 aa6.6□□□□□ -1.35
CNOT2-216ENST00000548939 A0A1W2PQU0 124 aa6.59□□□□□ -1.35
CNOT2-216ENST00000548939 SLC27A2O14975 620 aa6.59□□□□□ -1.35
CNOT2-216ENST00000548939 GPR42O15529 346 aa6.59□□□□□ -1.35
CNOT2-216ENST00000548939 B4GALT4O60513 344 aa6.59□□□□□ -1.35
CNOT2-216ENST00000548939 NFATC3Q12968 1075 aa6.59□□□□□ -1.35
CNOT2-216ENST00000548939 VASNQ6EMK4 673 aa6.59□□□□□ -1.35
CNOT2-216ENST00000548939 USP53Q70EK8 1073 aa6.59□□□□□ -1.35
CNOT2-216ENST00000548939 TTLL11Q8NHH1 800 aa6.59□□□□□ -1.35
CNOT2-216ENST00000548939 CDK5RAP1Q96SZ6 601 aaKnown RBP6.59□□□□□ -1.35
CNOT2-216ENST00000548939 KLC2Q9H0B6 622 aa6.59□□□□□ -1.35
CNOT2-216ENST00000548939 ZNF408Q9H9D4 720 aa6.59□□□□□ -1.35
CNOT2-216ENST00000548939 MSCO60682 206 aa6.58□□□□□ -1.36
CNOT2-216ENST00000548939 C6P13671 934 aa6.58□□□□□ -1.36
CNOT2-216ENST00000548939 GRIN1Q05586 938 aa6.58□□□□□ -1.36
CNOT2-216ENST00000548939 CDSNQ15517 529 aa6.58□□□□□ -1.36
CNOT2-216ENST00000548939 DNERQ8NFT8 737 aa6.58□□□□□ -1.36
CNOT2-216ENST00000548939 PHF20Q9BVI0 1012 aa6.58□□□□□ -1.36
CNOT2-216ENST00000548939 DEF6Q9H4E7 631 aa6.58□□□□□ -1.36
CNOT2-216ENST00000548939 CD248Q9HCU0 757 aa6.58□□□□□ -1.36
CNOT2-216ENST00000548939 PPARGC1AQ9UBK2 798 aaKnown RBP6.58□□□□□ -1.36
CNOT2-216ENST00000548939 R3HCC1Q9Y3T6 440 aaKnown RBP6.58□□□□□ -1.36
CNOT2-216ENST00000548939 DLX3O60479 287 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 FGRP09769 529 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 COL6A1P12109 1028 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 TACR2P21452 398 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 PHF19Q5T6S3 580 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 SLFN13Q68D06 897 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 ZNF585AQ6P3V2 769 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 RSPO2Q6UXX9 243 aaPredicted RBP6.57□□□□□ -1.36
CNOT2-216ENST00000548939 PROSER1Q86XN7 944 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 DTX3Q8N9I9 347 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 CLEC4DQ8WXI8 215 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 NUDT11Q96G61 164 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 PTPN18Q99952 460 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 DLL4Q9NR61 685 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 ST7Q9NRC1 585 aa6.57□□□□□ -1.36
CNOT2-216ENST00000548939 ARID5AQ03989 594 aa6.56□□□□□ -1.36
CNOT2-216ENST00000548939 HSP90AA2PQ14568 343 aaPredicted RBP6.56□□□□□ -1.36
CNOT2-216ENST00000548939 OTOP3Q7RTS5 596 aa6.56□□□□□ -1.36
CNOT2-216ENST00000548939 RBM12BQ8IXT5 1001 aaKnown RBP6.56□□□□□ -1.36
CNOT2-216ENST00000548939 ADAM29Q9UKF5 820 aa6.56□□□□□ -1.36
CNOT2-216ENST00000548939 FBXO21O94952 628 aa6.55□□□□□ -1.36
CNOT2-216ENST00000548939 GDF5P43026 501 aa6.55□□□□□ -1.36
CNOT2-216ENST00000548939 TUSC3Q13454 348 aa6.55□□□□□ -1.36
CNOT2-216ENST00000548939 SMAD2Q15796 467 aaKnown RBP6.55□□□□□ -1.36
CNOT2-216ENST00000548939 PALM2Q8IXS6 379 aa6.55□□□□□ -1.36
CNOT2-216ENST00000548939 HNRNPLLQ8WVV9 542 aaKnown RBP6.55□□□□□ -1.36
CNOT2-216ENST00000548939 TCAF1Q9Y4C2 921 aa6.55□□□□□ -1.36
CNOT2-216ENST00000548939 NUB1Q9Y5A7 615 aa6.55□□□□□ -1.36
CNOT2-216ENST00000548939 PATE3B3GLJ2 98 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 KLHL18O94889 574 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 CHGBP05060 677 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 CKMP06732 381 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 GNAT1P11488 350 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 COL6A2P12110 1019 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 FAHP16930 419 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 GRK2P25098 689 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 GRK3P35626 688 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 SELENOPP49908 381 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 SPIRE1Q08AE8 756 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 KIZQ2M2Z5 673 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 PAN2Q504Q3 1202 aaKnown RBP6.54□□□□□ -1.36
CNOT2-216ENST00000548939 LBX2Q6XYB7 198 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 Q6ZUG5 572 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 RALYLQ86SE5 291 aaKnown RBP6.54□□□□□ -1.36
CNOT2-216ENST00000548939 CELF2-AS1Q8N7Q2 184 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 UHMK1Q8TAS1 419 aaKnown RBP6.54□□□□□ -1.36
CNOT2-216ENST00000548939 DCAF4Q8WV16 495 aa6.54□□□□□ -1.36
CNOT2-216ENST00000548939 SGSM3Q96HU1 749 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms