RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 ZSCAN31Q96LW9 406 aaPredicted RBP9.95□□□□□ -0.82
SP1-203ENST00000548560 TBC1D32Q96NH3 1257 aa9.95□□□□□ -0.82
SP1-203ENST00000548560 ANO3Q9BYT9 981 aa9.95□□□□□ -0.82
SP1-203ENST00000548560 ZMYND12Q9H0C1 365 aa9.95□□□□□ -0.82
SP1-203ENST00000548560 SH2B1Q9NRF2 756 aaPredicted RBP9.95□□□□□ -0.82
SP1-203ENST00000548560 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
SP1-203ENST00000548560 ORC3Q9UBD5 711 aaPredicted RBP9.95□□□□□ -0.82
SP1-203ENST00000548560 SCN10AQ9Y5Y9 1956 aa9.95□□□□□ -0.82
SP1-203ENST00000548560 RANBP2P49792 3224 aaKnown RBP9.94□□□□□ -0.82
SP1-203ENST00000548560 MYH9P35579 1960 aaKnown RBP9.94□□□□□ -0.82
SP1-203ENST00000548560 MROH7Q68CQ1 1323 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 FIBPO43427 364 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 CABYRO75952 493 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 ARIH2O95376 493 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 TGFB3P10600 412 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 ZNF76P36508 570 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 RTP1P59025 263 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 NKX3-2P78367 333 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 LY6KQ17RY6 165 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 JAKMIP3Q5VZ66 844 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 MAMSTRQ6ZN01 415 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 DHX37Q8IY37 1157 aaKnown RBP9.94□□□□□ -0.82
SP1-203ENST00000548560 COPS5Q92905 334 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 PGBD1Q96JS3 809 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 INPP4AQ96PE3 977 aaPredicted RBP9.94□□□□□ -0.82
SP1-203ENST00000548560 KIF2CQ99661 725 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 BACH2Q9BYV9 841 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 CDHR5Q9HBB8 845 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 RTEL1Q9NZ71 1219 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 DDX41Q9UJV9 622 aaKnown RBP9.94□□□□□ -0.82
SP1-203ENST00000548560 ATP11BQ9Y2G3 1177 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 WDR81Q562E7 1941 aa9.94□□□□□ -0.82
SP1-203ENST00000548560 ELP1O95163 1332 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 A0A0U1RQG5 324 aaPredicted RBP9.93□□□□□ -0.82
SP1-203ENST00000548560 KPNA6O60684 536 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 GGPS1O95749 300 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 MYL3P08590 195 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 UBA1P22314 1058 aaKnown RBP9.93□□□□□ -0.82
SP1-203ENST00000548560 PTGS1P23219 599 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 CLK2P49760 499 aaKnown RBP9.93□□□□□ -0.82
SP1-203ENST00000548560 FXR1P51114 621 aaKnown RBP eCLIP9.93□□□□□ -0.82
SP1-203ENST00000548560 MRPS9P82933 396 aaKnown RBP9.93□□□□□ -0.82
SP1-203ENST00000548560 MTMR1Q13613 665 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 LAMC2Q13753 1193 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 TRIM29Q14134 588 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 NEDD9Q14511 834 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 LRRC26Q2I0M4 334 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 TMEM63BQ5T3F8 832 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 CCSAPQ6IQ19 270 aaPredicted RBP9.93□□□□□ -0.82
SP1-203ENST00000548560 GALNT17Q6IS24 598 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 CCDC62Q6P9F0 684 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 SLC39A5Q6ZMH5 540 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 CCDC83Q8IWF9 413 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 GIMAP8Q8ND71 665 aaPredicted RBP9.93□□□□□ -0.82
SP1-203ENST00000548560 NSUN7Q8NE18 718 aaKnown RBP9.93□□□□□ -0.82
SP1-203ENST00000548560 GPRASP2Q96D09 838 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 ALG1Q9BT22 464 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 MLXIPQ9HAP2 919 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 BRMS1Q9HCU9 246 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 TMEM260Q9NX78 707 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 PRKAG2Q9UGJ0 569 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 PCDHA4Q9UN74 947 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 LTBP2Q14767 1821 aa9.93□□□□□ -0.82
SP1-203ENST00000548560 NOP56O00567 594 aaKnown RBP9.92□□□□□ -0.82
SP1-203ENST00000548560 CTAGE5O15320 804 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 RGS20O76081 388 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 MMP3P08254 477 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 ICAM3P32942 547 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 SREBF1P36956 1147 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 MCM2P49736 904 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 HMGN5P82970 282 aaKnown RBP9.92□□□□□ -0.82
SP1-203ENST00000548560 ARHGAP4P98171 946 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 ARHGAP1Q07960 439 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 SNX17Q15036 470 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 DGKDQ16760 1214 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 TRIM60Q495X7 471 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 CELF3Q5SZQ8 465 aaKnown RBP9.92□□□□□ -0.82
SP1-203ENST00000548560 C1orf53Q5VUE5 145 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 CXCL17Q6UXB2 119 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 BLIDQ8IZY5 108 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 PPTC7Q8NI37 304 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 RASGRP4Q8TDF6 673 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 AFG1LQ8WV93 481 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 EMID1Q96A84 441 aaPredicted RBP9.92□□□□□ -0.82
SP1-203ENST00000548560 SPATA33Q96N06 139 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 AIFM3Q96NN9 605 aa9.92□□□□□ -0.82
SP1-203ENST00000548560 LLPHQ9BRT6 129 aaKnown RBP9.92□□□□□ -0.82
SP1-203ENST00000548560 MTG1Q9BT17 334 aaPredicted RBP9.92□□□□□ -0.82
SP1-203ENST00000548560 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
SP1-203ENST00000548560 A6NJR5 290 aa9.91□□□□□ -0.82
SP1-203ENST00000548560 DCDC2CA8MYV0 355 aa9.91□□□□□ -0.82
SP1-203ENST00000548560 SPATA31C2B4DYI2 1134 aa9.91□□□□□ -0.82
SP1-203ENST00000548560 TLR3O15455 904 aaKnown RBP9.91□□□□□ -0.82
SP1-203ENST00000548560 MAFGO15525 162 aa9.91□□□□□ -0.82
SP1-203ENST00000548560 SORBS3O60504 671 aa9.91□□□□□ -0.82
SP1-203ENST00000548560 PQBP1O60828 265 aaKnown RBP9.91□□□□□ -0.82
SP1-203ENST00000548560 CTDNEP1O95476 244 aa9.91□□□□□ -0.82
SP1-203ENST00000548560 PURAQ00577 322 aaKnown RBP9.91□□□□□ -0.82
SP1-203ENST00000548560 SETQ01105 290 aaPredicted RBP9.91□□□□□ -0.82
SP1-203ENST00000548560 CEP55Q53EZ4 464 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms