RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 RTP1P59025 263 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 TNFAIP2Q03169 654 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 RESP18Q5W5W9 173 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 RNF180Q86T96 592 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 DIS3L2Q8IYB7 885 aaKnown RBP19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 DNERQ8NFT8 737 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 AIFM3Q96NN9 605 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 TAAR1Q96RJ0 339 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 SPZ1Q9BXG8 430 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 MAF1Q9H063 256 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 MRPL11Q9Y3B7 192 aaKnown RBP19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 A0A1B0GVL5 298 aa19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 RBM47A0AV96 593 aaKnown RBP19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 HSD17B4P51659 736 aa19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 ACLYP53396 1101 aa19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 KCNA10Q16322 511 aa19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 HABP4Q5JVS0 413 aaKnown RBP19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 LUZP1Q86V48 1076 aa19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 PLA2G4DQ86XP0 818 aa19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 SRBD1Q8N5C6 995 aaKnown RBP19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 KRI1Q8N9T8 703 aaKnown RBP19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 CTCFLQ8NI51 663 aaPredicted RBP19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 DNAJC25Q9H1X3 360 aa19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 PCDHA1Q9Y5I3 950 aa19.52■□□□□ 0.72
RBFOX1-207ENST00000547338 PNMA6FA0A0J9YX94 578 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 BECN2A8MW95 431 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 SYKP43405 635 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 FUT2Q10981 343 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 C1orf53Q5VUE5 145 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 CMTR1Q8N1G2 835 aaKnown RBP19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 CCDC34Q96HJ3 373 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 MRFAP1L1Q96HT8 127 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 TSEN34Q9BSV6 310 aaKnown RBP19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 GJB4Q9NTQ9 266 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 LTBP2Q14767 1821 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 SMTNL1A8MU46 457 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 C6orf222P0C671 652 aaPredicted RBP19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 PFKFB1P16118 471 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 TPM4P67936 248 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 BEX3Q00994 111 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 TRIM60Q495X7 471 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 KANK3Q6NY19 840 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 TMTC3Q6ZXV5 915 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 PIBF1Q8WXW3 757 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 GDF15Q99988 308 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 FAM13BQ9NYF5 915 aa19.51■□□□□ 0.71
RBFOX1-207ENST00000547338 LAMA3Q16787 3333 aa19.5■□□□□ 0.71
RBFOX1-207ENST00000547338 BTBD18B2RXH4 712 aa19.5■□□□□ 0.71
RBFOX1-207ENST00000547338 ZNF75DP51815 510 aa19.5■□□□□ 0.71
RBFOX1-207ENST00000547338 NLRP12P59046 1061 aa19.5■□□□□ 0.71
RBFOX1-207ENST00000547338 IQSEC1Q6DN90 963 aa19.5■□□□□ 0.71
RBFOX1-207ENST00000547338 TLK2Q86UE8 772 aa19.5■□□□□ 0.71
RBFOX1-207ENST00000547338 MCF2L2Q86YR7 1114 aa19.5■□□□□ 0.71
RBFOX1-207ENST00000547338 PHF20Q9BVI0 1012 aa19.5■□□□□ 0.71
RBFOX1-207ENST00000547338 SH3GLB2Q9NR46 395 aa19.5■□□□□ 0.71
RBFOX1-207ENST00000547338 NEMFO60524 1076 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 CFBP00751 764 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 SMARCA1P28370 1054 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 HOXA13P31271 388 aaPredicted RBP19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 KRT2P35908 639 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 TRAPPC10P48553 1259 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 PLCB2Q00722 1185 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 DUSP28Q4G0W2 176 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 LZTS2Q9BRK4 669 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 TRIM5Q9C035 493 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 TUBE1Q9UJT0 475 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 ATP11BQ9Y2G3 1177 aa19.49■□□□□ 0.71
RBFOX1-207ENST00000547338 MOXD2PA6NHM9 499 aa19.48■□□□□ 0.71
RBFOX1-207ENST00000547338 ARIH2O95376 493 aa19.48■□□□□ 0.71
RBFOX1-207ENST00000547338 ASGR1P07306 291 aa19.48■□□□□ 0.71
RBFOX1-207ENST00000547338 PDE4DQ08499 809 aa19.48■□□□□ 0.71
RBFOX1-207ENST00000547338 RMDN3Q96TC7 470 aa19.48■□□□□ 0.71
RBFOX1-207ENST00000547338 SRPRBQ9Y5M8 271 aaKnown RBP19.48■□□□□ 0.71
RBFOX1-207ENST00000547338 KIAA1217Q5T5P2 1943 aa19.48■□□□□ 0.71
RBFOX1-207ENST00000547338 DYNC1LI2O43237 492 aaPredicted RBP19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 AP5Z1O43299 807 aa19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 MAGEA10P43363 369 aaPredicted RBP19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 PKN1Q16512 942 aa19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 GNASQ5JWF2 1037 aa19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 SH3RF1Q7Z6J0 888 aa19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 IL31RAQ8NI17 732 aa19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 NSUN6Q8TEA1 469 aaKnown RBP19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 WDR11Q9BZH6 1224 aa19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 PXMP2Q9NR77 195 aa19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 Q9Y3F1 56 aa19.47■□□□□ 0.71
RBFOX1-207ENST00000547338 hCG_1642624A0A1W2PR95 340 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 IKBKBO14920 756 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 EIF2AK2P19525 551 aaKnown RBP19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 MARCKSP29966 332 aaPredicted RBP19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 TLE2Q04725 743 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 FSCN1Q16658 493 aaKnown RBP19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 CT47A1Q5JQC4 288 aaPredicted RBP19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 GALNT17Q6IS24 598 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 CCDC62Q6P9F0 684 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 SHC4Q6S5L8 630 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 COPS5Q92905 334 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 PYM1Q9BRP8 204 aaKnown RBP19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 PDLIM7Q9NR12 457 aa19.46■□□□□ 0.71
RBFOX1-207ENST00000547338 V9GY48 417 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms