RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 HERC6Q8IVU3 1022 aa16.55■□□□□ 0.24
COL2A1-209ENST00000546974 NEK1Q96PY6 1258 aa16.55■□□□□ 0.24
COL2A1-209ENST00000546974 PSTPIP2Q9H939 334 aa16.55■□□□□ 0.24
COL2A1-209ENST00000546974 NBNO60934 754 aa16.54■□□□□ 0.24
COL2A1-209ENST00000546974 CA3P07451 260 aa16.54■□□□□ 0.24
COL2A1-209ENST00000546974 HOXC8P31273 242 aa16.54■□□□□ 0.24
COL2A1-209ENST00000546974 KCNJ6P48051 423 aa16.54■□□□□ 0.24
COL2A1-209ENST00000546974 EXOSC10Q01780 885 aaKnown RBP16.54■□□□□ 0.24
COL2A1-209ENST00000546974 HIC1Q14526 733 aa16.54■□□□□ 0.24
COL2A1-209ENST00000546974 ZNF618Q5T7W0 954 aa16.54■□□□□ 0.24
COL2A1-209ENST00000546974 RAB11FIP4Q86YS3 637 aa16.54■□□□□ 0.24
COL2A1-209ENST00000546974 CCDC82Q8N4S0 544 aa16.54■□□□□ 0.24
COL2A1-209ENST00000546974 GIMAP8Q8ND71 665 aaPredicted RBP16.54■□□□□ 0.24
COL2A1-209ENST00000546974 WNT8BQ93098 351 aa16.54■□□□□ 0.24
COL2A1-209ENST00000546974 GPR20Q99678 358 aa16.54■□□□□ 0.24
COL2A1-209ENST00000546974 C17orf102A2RUQ5 167 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 CDC45O75419 566 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 SMIM10L2AP0DMW4 78 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 SMIM10L2BP0DMW5 78 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 IGFBP4P22692 258 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 WDR5P61964 334 aaKnown RBP16.53■□□□□ 0.24
COL2A1-209ENST00000546974 TRAF7Q6Q0C0 670 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 APOA5Q6Q788 366 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 DHX32Q7L7V1 743 aaKnown RBP16.53■□□□□ 0.24
COL2A1-209ENST00000546974 SERINC5Q86VE9 423 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 MICU3Q86XE3 530 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 PPM1EQ8WY54 764 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 ATP6V0A1Q93050 837 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 GPRASP2Q96D09 838 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 CDHR1Q96JP9 859 aa16.53■□□□□ 0.24
COL2A1-209ENST00000546974 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
COL2A1-209ENST00000546974 MUC3AQ02505 3323 aa16.52■□□□□ 0.24
COL2A1-209ENST00000546974 XIRP2A4UGR9 3374 aa16.52■□□□□ 0.24
COL2A1-209ENST00000546974 ABHD14A-ACY1A0A1B0GW23 586 aa16.52■□□□□ 0.24
COL2A1-209ENST00000546974 hCG_1642624A0A1W2PR95 340 aa16.52■□□□□ 0.24
COL2A1-209ENST00000546974 EFCAB14O75071 495 aa16.52■□□□□ 0.24
COL2A1-209ENST00000546974 KRT32Q14532 448 aa16.52■□□□□ 0.24
COL2A1-209ENST00000546974 RASEFQ8IZ41 740 aa16.52■□□□□ 0.24
COL2A1-209ENST00000546974 SYMPKQ92797 1274 aaKnown RBP16.52■□□□□ 0.24
COL2A1-209ENST00000546974 RNPEPQ9H4A4 650 aa16.52■□□□□ 0.24
COL2A1-209ENST00000546974 EMSYQ7Z589 1322 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 SPDYE3A6NKU9 549 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 TLL1O43897 1013 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 GNAT1P11488 350 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 THPOP40225 353 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 TAP1Q03518 808 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 IKBKEQ14164 716 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 MBTPS1Q14703 1052 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 UBE2SQ16763 222 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 HEATR3Q7Z4Q2 680 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 TEX2Q8IWB9 1127 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 ZNF215Q9UL58 517 aaPredicted RBP16.51■□□□□ 0.23
COL2A1-209ENST00000546974 PCDHA6Q9UN73 950 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 PCDHA8Q9Y5H6 950 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 PRRC2BQ5JSZ5 2229 aaKnown RBP16.51■□□□□ 0.23
COL2A1-209ENST00000546974 MICAL3Q7RTP6 2002 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 TTC28Q96AY4 2481 aa16.51■□□□□ 0.23
COL2A1-209ENST00000546974 CNTNAP5Q8WYK1 1306 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 RSPH10B2B2RC85 870 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 MAFGO15525 162 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 TREHO43280 583 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 ZBTB43O43298 467 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 CAND2O75155 1236 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 LGR5O75473 907 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 HMGB1P09429 215 aaKnown RBP16.5■□□□□ 0.23
COL2A1-209ENST00000546974 RSPH10BP0C881 870 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 KCNA2P16389 499 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 POU3F3P20264 500 aaPredicted RBP16.5■□□□□ 0.23
COL2A1-209ENST00000546974 DEFB103AP81534 67 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 RTN1Q16799 776 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 TCTN1Q2MV58 587 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 ADCK5Q3MIX3 580 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 TJAP1Q5JTD0 557 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 ATXN2LQ8WWM7 1075 aaKnown RBP16.5■□□□□ 0.23
COL2A1-209ENST00000546974 EHMT1Q9H9B1 1298 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 PRDM6Q9NQX0 595 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 TELO2Q9Y4R8 837 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 UBIAD1Q9Y5Z9 338 aa16.5■□□□□ 0.23
COL2A1-209ENST00000546974 ATP9AO75110 1047 aa16.49■□□□□ 0.23
COL2A1-209ENST00000546974 ITGB5P18084 799 aa16.49■□□□□ 0.23
COL2A1-209ENST00000546974 FUT2Q10981 343 aa16.49■□□□□ 0.23
COL2A1-209ENST00000546974 CCDC85BQ15834 202 aaPredicted RBP16.49■□□□□ 0.23
COL2A1-209ENST00000546974 UTP14CQ5TAP6 766 aaKnown RBP16.49■□□□□ 0.23
COL2A1-209ENST00000546974 WWC2Q6AWC2 1192 aa16.49■□□□□ 0.23
COL2A1-209ENST00000546974 PPP1R18Q6NYC8 613 aa16.49■□□□□ 0.23
COL2A1-209ENST00000546974 TCEANC2Q96MN5 208 aa16.49■□□□□ 0.23
COL2A1-209ENST00000546974 ZBED2Q9BTP6 218 aa16.49■□□□□ 0.23
COL2A1-209ENST00000546974 SETD4Q9NVD3 440 aa16.49■□□□□ 0.23
COL2A1-209ENST00000546974 THEGQ9P2T0 379 aa16.49■□□□□ 0.23
COL2A1-209ENST00000546974 ARHGEF15O94989 841 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 GJB5O95377 273 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 TCF7P36402 384 aaPredicted RBP16.48■□□□□ 0.23
COL2A1-209ENST00000546974 RCAN1P53805 252 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 NAPAP54920 295 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 ADAM17P78536 824 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 SP4Q02446 784 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 MTMR1Q13613 665 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 TRIM50Q86XT4 487 aa16.48■□□□□ 0.23
COL2A1-209ENST00000546974 DBF4BQ8NFT6 615 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms