RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 BRAPQ7Z569 592 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 NECAB2Q7Z6G3 386 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 PPTC7Q8NI37 304 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 AFG1LQ8WV93 481 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 MBOAT7Q96N66 472 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 PKD2L1Q9P0L9 805 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 NFASCO94856 1347 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 LRRC37A2A6NM11 1700 aa15.6■□□□□ 0.09
PTCH1-213ENST00000546820 HTTP42858 3142 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 FAM205CA6NFA0 338 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 KIF28PB7ZC32 967 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 EDIL3O43854 480 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 CABYRO75952 493 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 FARP2O94887 1054 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-213ENST00000546820 ACLYP53396 1101 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 BEX3Q00994 111 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 ORC2Q13416 577 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-213ENST00000546820 RILPL1Q5EBL4 403 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 VTI1AQ96AJ9 217 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 FAM20AQ96MK3 541 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 RIT2Q99578 217 aa15.59■□□□□ 0.09
PTCH1-213ENST00000546820 ZSCAN16Q9H4T2 348 aaPredicted RBP15.59■□□□□ 0.09
PTCH1-213ENST00000546820 TBX3O15119 743 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 MSH4O15457 936 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 SORBS3O60504 671 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 ASGR1P07306 291 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 MYL3P08590 195 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 HSDL1Q3SXM5 330 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 CCSAPQ6IQ19 270 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-213ENST00000546820 SLFN12Q8IYM2 578 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 SEPT1Q8WYJ6 367 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 LENG9Q96B70 501 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 PAWRQ96IZ0 340 aaKnown RBP15.58■□□□□ 0.08
PTCH1-213ENST00000546820 GLT1D1Q96MS3 346 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 C11orf49Q9H6J7 331 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 JPH1Q9HDC5 661 aaPredicted RBP15.58■□□□□ 0.08
PTCH1-213ENST00000546820 SLC9A2Q9UBY0 812 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 PHF24Q9UPV7 400 aa15.58■□□□□ 0.08
PTCH1-213ENST00000546820 MYADML2A6NDP7 307 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 CTAGE5O15320 804 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 GAS7O60861 476 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 MMP3P08254 477 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 PTGS1P23219 599 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 MCM7P33993 719 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 KRT76Q01546 638 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 SP4Q02446 784 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 ZNF174Q15697 407 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 CALCRLQ16602 461 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 TTC38Q5R3I4 469 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 LRCH2Q5VUJ6 765 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 PIAS4Q8N2W9 510 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-213ENST00000546820 SLC5A5Q92911 643 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 MTG1Q9BT17 334 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-213ENST00000546820 TEKT3Q9BXF9 490 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 SENP6Q9GZR1 1112 aaPredicted RBP15.57■□□□□ 0.08
PTCH1-213ENST00000546820 MTMR6Q9Y217 621 aa15.57■□□□□ 0.08
PTCH1-213ENST00000546820 DHX15O43143 795 aaKnown RBP15.56■□□□□ 0.08
PTCH1-213ENST00000546820 SLC37A4O43826 429 aa15.56■□□□□ 0.08
PTCH1-213ENST00000546820 NEMFO60524 1076 aa15.56■□□□□ 0.08
PTCH1-213ENST00000546820 IRX5P78411 483 aaPredicted RBP15.56■□□□□ 0.08
PTCH1-213ENST00000546820 ITGB3BPQ13352 177 aaPredicted RBP15.56■□□□□ 0.08
PTCH1-213ENST00000546820 ZNF746Q6NUN9 644 aaPredicted RBP15.56■□□□□ 0.08
PTCH1-213ENST00000546820 FERMT2Q96AC1 680 aa15.56■□□□□ 0.08
PTCH1-213ENST00000546820 GPR20Q99678 358 aa15.56■□□□□ 0.08
PTCH1-213ENST00000546820 SEZ6LQ9BYH1 1024 aa15.56■□□□□ 0.08
PTCH1-213ENST00000546820 BCAS3Q9H6U6 928 aa15.56■□□□□ 0.08
PTCH1-213ENST00000546820 STARD7Q9NQZ5 370 aa15.56■□□□□ 0.08
PTCH1-213ENST00000546820 ELP1O95163 1332 aa15.56■□□□□ 0.08
PTCH1-213ENST00000546820 DDX39AO00148 427 aaKnown RBP15.55■□□□□ 0.08
PTCH1-213ENST00000546820 CAPN15O75808 1086 aa15.55■□□□□ 0.08
PTCH1-213ENST00000546820 MNX1P50219 401 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-213ENST00000546820 PURAQ00577 322 aaKnown RBP15.55■□□□□ 0.08
PTCH1-213ENST00000546820 CXCL17Q6UXB2 119 aa15.55■□□□□ 0.08
PTCH1-213ENST00000546820 FERMT3Q86UX7 667 aa15.55■□□□□ 0.08
PTCH1-213ENST00000546820 SMAP1Q8IYB5 467 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-213ENST00000546820 ETNPPLQ8TBG4 499 aa15.55■□□□□ 0.08
PTCH1-213ENST00000546820 UIMC1Q96RL1 719 aa15.55■□□□□ 0.08
PTCH1-213ENST00000546820 KATNAL1Q9BW62 490 aa15.55■□□□□ 0.08
PTCH1-213ENST00000546820 AZI2Q9H6S1 392 aa15.55■□□□□ 0.08
PTCH1-213ENST00000546820 KCNMB3Q9NPA1 279 aa15.55■□□□□ 0.08
PTCH1-213ENST00000546820 PCDHA12Q9UN75 941 aa15.55■□□□□ 0.08
PTCH1-213ENST00000546820 A0A1W2PQ45 241 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-213ENST00000546820 GSTTP1A0A1W2PQM5 241 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 A0A1W2PQY0 241 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 LAD1O00515 517 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 PSMD10O75832 226 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 ZSCAN22P10073 491 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-213ENST00000546820 COL6A1P12109 1028 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 HOXD8P13378 290 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-213ENST00000546820 SFNP31947 248 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 TCF7P36402 384 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-213ENST00000546820 TOB1P50616 345 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-213ENST00000546820 JAK3P52333 1124 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 ACTR2P61160 394 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 MIS18BP1Q6P0N0 1132 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 DIS3LQ8TF46 1054 aaKnown RBP15.54■□□□□ 0.08
PTCH1-213ENST00000546820 HTATIP2Q9BUP3 242 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 SMARCAD1Q9H4L7 1026 aa15.54■□□□□ 0.08
PTCH1-213ENST00000546820 ZNF215Q9UL58 517 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms