RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 EDIL3O43854 480 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 MYL3P08590 195 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 HOXD8P13378 290 aaPredicted RBP19.1■□□□□ 0.65
CCDC38-203ENST00000546803 GUCY1B3Q02153 619 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 SNX17Q15036 470 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 INF2Q27J81 1249 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 HSDL1Q3SXM5 330 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 PRR16Q569H4 304 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 NEK8Q86SG6 692 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 SDF4Q9BRK5 362 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 FOXP1Q9H334 677 aaPredicted RBP19.1■□□□□ 0.65
CCDC38-203ENST00000546803 CENPFP49454 3210 aa19.1■□□□□ 0.65
CCDC38-203ENST00000546803 A0A0U1RQG5 324 aaPredicted RBP19.09■□□□□ 0.65
CCDC38-203ENST00000546803 GCFC2P16383 781 aaKnown RBP19.09■□□□□ 0.65
CCDC38-203ENST00000546803 ATN1P54259 1190 aaPredicted RBP19.09■□□□□ 0.65
CCDC38-203ENST00000546803 LRRC26Q2I0M4 334 aa19.09■□□□□ 0.65
CCDC38-203ENST00000546803 Q4G0T1 1027 aa19.09■□□□□ 0.65
CCDC38-203ENST00000546803 DPF3Q92784 378 aa19.09■□□□□ 0.65
CCDC38-203ENST00000546803 MBOAT7Q96N66 472 aa19.09■□□□□ 0.65
CCDC38-203ENST00000546803 IPO5O00410 1097 aaKnown RBP19.08■□□□□ 0.64
CCDC38-203ENST00000546803 SORBS3O60504 671 aa19.08■□□□□ 0.64
CCDC38-203ENST00000546803 LETM2Q2VYF4 491 aa19.08■□□□□ 0.64
CCDC38-203ENST00000546803 PPP4R3AQ6IN85 833 aa19.08■□□□□ 0.64
CCDC38-203ENST00000546803 LENG9Q96B70 501 aa19.08■□□□□ 0.64
CCDC38-203ENST00000546803 GPR20Q99678 358 aa19.08■□□□□ 0.64
CCDC38-203ENST00000546803 ZNF577Q9BSK1 485 aa19.08■□□□□ 0.64
CCDC38-203ENST00000546803 BCAS3Q9H6U6 928 aa19.08■□□□□ 0.64
CCDC38-203ENST00000546803 JPH1Q9HDC5 661 aaPredicted RBP19.08■□□□□ 0.64
CCDC38-203ENST00000546803 TBC1D22BQ9NU19 505 aa19.08■□□□□ 0.64
CCDC38-203ENST00000546803 PKD2L1Q9P0L9 805 aa19.08■□□□□ 0.64
CCDC38-203ENST00000546803 EVI5O60447 810 aa19.07■□□□□ 0.64
CCDC38-203ENST00000546803 RTP1P59025 263 aa19.07■□□□□ 0.64
CCDC38-203ENST00000546803 GNL2Q13823 731 aaKnown RBP19.07■□□□□ 0.64
CCDC38-203ENST00000546803 EARS2Q5JPH6 523 aaKnown RBP19.07■□□□□ 0.64
CCDC38-203ENST00000546803 SEPT1Q8WYJ6 367 aa19.07■□□□□ 0.64
CCDC38-203ENST00000546803 KATNAL1Q9BW62 490 aa19.07■□□□□ 0.64
CCDC38-203ENST00000546803 SLC9A2Q9UBY0 812 aa19.07■□□□□ 0.64
CCDC38-203ENST00000546803 MROH7Q68CQ1 1323 aa19.06■□□□□ 0.64
CCDC38-203ENST00000546803 H3BQV1 296 aa19.06■□□□□ 0.64
CCDC38-203ENST00000546803 ARVCFO00192 962 aa19.06■□□□□ 0.64
CCDC38-203ENST00000546803 TDP2O95551 362 aa19.06■□□□□ 0.64
CCDC38-203ENST00000546803 ITGB3BPQ13352 177 aaPredicted RBP19.06■□□□□ 0.64
CCDC38-203ENST00000546803 ITGA7Q13683 1181 aa19.06■□□□□ 0.64
CCDC38-203ENST00000546803 LARP1BQ659C4 914 aaKnown RBP19.06■□□□□ 0.64
CCDC38-203ENST00000546803 SLC43A3Q8NBI5 491 aa19.06■□□□□ 0.64
CCDC38-203ENST00000546803 TOX2Q96NM4 488 aa19.06■□□□□ 0.64
CCDC38-203ENST00000546803 DDX25Q9UHL0 483 aaKnown RBP19.06■□□□□ 0.64
CCDC38-203ENST00000546803 NR2E3Q9Y5X4 410 aa19.06■□□□□ 0.64
CCDC38-203ENST00000546803 FRMPD3Q5JV73 1810 aa19.06■□□□□ 0.64
CCDC38-203ENST00000546803 DHX15O43143 795 aaKnown RBP19.05■□□□□ 0.64
CCDC38-203ENST00000546803 F2P00734 622 aa19.05■□□□□ 0.64
CCDC38-203ENST00000546803 PDCP20941 246 aa19.05■□□□□ 0.64
CCDC38-203ENST00000546803 U2AF2P26368 475 aaKnown RBP eCLIP19.05■□□□□ 0.64
CCDC38-203ENST00000546803 CDK7P50613 346 aa19.05■□□□□ 0.64
CCDC38-203ENST00000546803 SP4Q02446 784 aa19.05■□□□□ 0.64
CCDC38-203ENST00000546803 TRIM60Q495X7 471 aa19.05■□□□□ 0.64
CCDC38-203ENST00000546803 ANKRD33Q7Z3H0 272 aa19.05■□□□□ 0.64
CCDC38-203ENST00000546803 NOSTRINQ8IVI9 506 aa19.05■□□□□ 0.64
CCDC38-203ENST00000546803 RIT2Q99578 217 aa19.05■□□□□ 0.64
CCDC38-203ENST00000546803 TCEAL9Q9UHQ7 104 aa19.05■□□□□ 0.64
CCDC38-203ENST00000546803 GRIN2DO15399 1336 aa19.04■□□□□ 0.64
CCDC38-203ENST00000546803 FAM205CA6NFA0 338 aa19.04■□□□□ 0.64
CCDC38-203ENST00000546803 MSH4O15457 936 aa19.04■□□□□ 0.64
CCDC38-203ENST00000546803 CCNT1O60563 726 aaKnown RBP19.04■□□□□ 0.64
CCDC38-203ENST00000546803 LGALS2P05162 132 aa19.04■□□□□ 0.64
CCDC38-203ENST00000546803 PSMC6P62333 389 aa19.04■□□□□ 0.64
CCDC38-203ENST00000546803 PTPN11Q06124 597 aaPredicted RBP19.04■□□□□ 0.64
CCDC38-203ENST00000546803 NFRKBQ6P4R8 1299 aa19.04■□□□□ 0.64
CCDC38-203ENST00000546803 KAT2BQ92831 832 aa19.04■□□□□ 0.64
CCDC38-203ENST00000546803 SLC5A5Q92911 643 aa19.04■□□□□ 0.64
CCDC38-203ENST00000546803 C16orf70Q9BSU1 422 aa19.04■□□□□ 0.64
CCDC38-203ENST00000546803 ATP11BQ9Y2G3 1177 aa19.04■□□□□ 0.64
CCDC38-203ENST00000546803 GSTTP1A0A1W2PQM5 241 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 DCDC2CA8MYV0 355 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 HAS3O00219 553 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 TBX3O15119 743 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 ZNF286BP0CG31 522 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 TCF7P36402 384 aaPredicted RBP19.03■□□□□ 0.64
CCDC38-203ENST00000546803 TRAPPC10P48553 1259 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 PSEN2P49810 448 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 ACTR2P61160 394 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 KRT76Q01546 638 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 TLE2Q04725 743 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 NBPF20Q3BBV1 942 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 ZNF746Q6NUN9 644 aaPredicted RBP19.03■□□□□ 0.64
CCDC38-203ENST00000546803 ETNPPLQ8TBG4 499 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 FAM20AQ96MK3 541 aa19.03■□□□□ 0.64
CCDC38-203ENST00000546803 ZNF215Q9UL58 517 aaPredicted RBP19.03■□□□□ 0.64
CCDC38-203ENST00000546803 KIAA1217Q5T5P2 1943 aa19.02■□□□□ 0.64
CCDC38-203ENST00000546803 H3BRB1 525 aa19.02■□□□□ 0.64
CCDC38-203ENST00000546803 TLR3O15455 904 aaKnown RBP19.02■□□□□ 0.64
CCDC38-203ENST00000546803 SLC37A4O43826 429 aa19.02■□□□□ 0.64
CCDC38-203ENST00000546803 PQBP1O60828 265 aaKnown RBP19.02■□□□□ 0.64
CCDC38-203ENST00000546803 GAS7O60861 476 aa19.02■□□□□ 0.64
CCDC38-203ENST00000546803 ATG7O95352 703 aa19.02■□□□□ 0.64
CCDC38-203ENST00000546803 MFSD10Q14728 455 aa19.02■□□□□ 0.64
CCDC38-203ENST00000546803 LRCH2Q5VUJ6 765 aa19.02■□□□□ 0.64
CCDC38-203ENST00000546803 SESTD1Q86VW0 696 aa19.02■□□□□ 0.64
CCDC38-203ENST00000546803 SMAP1Q8IYB5 467 aaPredicted RBP19.02■□□□□ 0.64
CCDC38-203ENST00000546803 C7orf61Q8IZ16 206 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms