RNA–Protein interactions for RNA: ENST00000546774.1

CALCOCO1-205, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-205ENST00000546774 HERVK_113Q902F9 699 aa9.45□□□□□ -0.9
CALCOCO1-205ENST00000546774 BRF1Q92994 677 aa9.45□□□□□ -0.9
CALCOCO1-205ENST00000546774 KATNAL1Q9BW62 490 aa9.45□□□□□ -0.9
CALCOCO1-205ENST00000546774 SEMA6BQ9H3T3 888 aa9.45□□□□□ -0.9
CALCOCO1-205ENST00000546774 HDAC6Q9UBN7 1215 aa9.45□□□□□ -0.9
CALCOCO1-205ENST00000546774 PCDHA6Q9UN73 950 aa9.45□□□□□ -0.9
CALCOCO1-205ENST00000546774 PCDHA8Q9Y5H6 950 aa9.45□□□□□ -0.9
CALCOCO1-205ENST00000546774 SPDYE3A6NKU9 549 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 GRXCR1A8MXD5 290 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 HAS3O00219 553 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 FIBPO43427 364 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 F2P00734 622 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 IQCF3P0C7M6 154 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 HOXD8P13378 290 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 ITGB5P18084 799 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 RPS6KB1P23443 525 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 PSMA5P28066 241 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 METAP2P50579 478 aaKnown RBP eCLIP9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 RCAN1P53805 252 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 NAPAP54920 295 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 BFSP2Q13515 415 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 NEDD9Q14511 834 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 E2F4Q16254 413 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 ERICH6BQ5W0A0 696 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 NLRX1Q86UT6 975 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 RETREG2Q8NC44 543 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 VWCEQ96DN2 955 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 FAM212AQ96EL1 285 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 CTAGE1Q96RT6 745 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 C16orf70Q9BSU1 422 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 USP26Q9BXU7 913 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 TTYH1Q9H313 450 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 CXXC1Q9P0U4 656 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 GTF2IRD1Q9UHL9 959 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 STXBP5LQ9Y2K9 1186 aa9.44□□□□□ -0.9
CALCOCO1-205ENST00000546774 CCDC196A0A1B0GTZ2 297 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 SMCO2A6NFE2 343 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 H3BRB1 525 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 STXBP3O00186 592 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 PITPNM1O00562 1244 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 NOP56O00567 594 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 ATP9AO75110 1047 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 DNAJB2P25686 324 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 PBX2P40425 430 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 ADCY7P51828 1080 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 ZNF200P98182 395 aaPredicted RBP9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 SP4Q02446 784 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 METTL7BQ6UX53 244 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 RUFY3Q7L099 469 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 FBXL16Q8N461 479 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 DHX38Q92620 1227 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 GUCD1Q96NT3 240 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 GPR20Q99678 358 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 SENP7Q9BQF6 1050 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 MTIF3Q9H2K0 278 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 TUT1Q9H6E5 874 aaKnown RBP9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 RIC8AQ9NPQ8 531 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 BARHL2Q9NY43 387 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 TELO2Q9Y4R8 837 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 WDR81Q562E7 1941 aa9.43□□□□□ -0.9
CALCOCO1-205ENST00000546774 hCG_1984214I3L0E3 225 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 EPB41L2O43491 1005 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 LGALS2P05162 132 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 CENPBP07199 599 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 PFKMP08237 780 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 CKBP12277 381 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 KCNA2P16389 499 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 RFC2P35250 354 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 PTK7Q13308 1070 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 MTMR1Q13613 665 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 HIC1Q14526 733 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 PFKFB3Q16875 520 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 PPP1R18Q6NYC8 613 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 KCTD17Q8N5Z5 321 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 CCDC155Q8N6L0 562 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 ZNF713Q8N859 430 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 GIMAP8Q8ND71 665 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 CAGE1Q8TC20 777 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 TIFAQ96CG3 184 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 GPRASP2Q96D09 838 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 PGBD1Q96JS3 809 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 CDX2Q99626 313 aaPredicted RBP9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 PBX4Q9BYU1 374 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 AGXT2Q9BYV1 514 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 FTOQ9C0B1 505 aaKnown RBP eCLIP9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 EHMT1Q9H9B1 1298 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 ZSWIM6Q9HCJ5 1215 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 JADE2Q9NQC1 790 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 TMEM260Q9NX78 707 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 UBIAD1Q9Y5Z9 338 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 MYH9P35579 1960 aaKnown RBP9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 PTPRSQ13332 1948 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 LOXHD1Q8IVV2 1947 aa9.42□□□□□ -0.9
CALCOCO1-205ENST00000546774 CDH23Q9H251 3354 aa9.41□□□□□ -0.9
CALCOCO1-205ENST00000546774 C17orf102A2RUQ5 167 aa9.41□□□□□ -0.9
CALCOCO1-205ENST00000546774 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
CALCOCO1-205ENST00000546774 MAFGO15525 162 aa9.41□□□□□ -0.9
CALCOCO1-205ENST00000546774 PRPF3O43395 683 aaKnown RBP9.41□□□□□ -0.9
CALCOCO1-205ENST00000546774 PPFIA3O75145 1194 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms