RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 PIK3CDO00329 1044 aa21.54■■□□□ 1.04
CHERP-204ENST00000546538 SMARCA1P28370 1054 aa21.54■■□□□ 1.04
CHERP-204ENST00000546538 CREB3L3Q68CJ9 461 aa21.54■■□□□ 1.04
CHERP-204ENST00000546538 CYFIP1Q7L576 1253 aa21.54■■□□□ 1.04
CHERP-204ENST00000546538 MICALL1Q8N3F8 863 aa21.54■■□□□ 1.04
CHERP-204ENST00000546538 CTCFLQ8NI51 663 aaPredicted RBP21.54■■□□□ 1.04
CHERP-204ENST00000546538 SYMPKQ92797 1274 aaKnown RBP21.54■■□□□ 1.04
CHERP-204ENST00000546538 RRP36Q96EU6 259 aaKnown RBP21.54■■□□□ 1.04
CHERP-204ENST00000546538 GPR20Q99678 358 aa21.54■■□□□ 1.04
CHERP-204ENST00000546538 MTA3Q9BTC8 594 aa21.54■■□□□ 1.04
CHERP-204ENST00000546538 TUT1Q9H6E5 874 aaKnown RBP21.54■■□□□ 1.04
CHERP-204ENST00000546538 TLL1O43897 1013 aa21.53■■□□□ 1.04
CHERP-204ENST00000546538 SMIM10L2AP0DMW4 78 aa21.53■■□□□ 1.04
CHERP-204ENST00000546538 SMIM10L2BP0DMW5 78 aa21.53■■□□□ 1.04
CHERP-204ENST00000546538 MCM5P33992 734 aa21.53■■□□□ 1.04
CHERP-204ENST00000546538 TFF2Q03403 129 aa21.53■■□□□ 1.04
CHERP-204ENST00000546538 PCNX4Q63HM2 1172 aa21.53■■□□□ 1.04
CHERP-204ENST00000546538 METTL7BQ6UX53 244 aa21.53■■□□□ 1.04
CHERP-204ENST00000546538 RNPEPQ9H4A4 650 aa21.53■■□□□ 1.04
CHERP-204ENST00000546538 MICAL3Q7RTP6 2002 aa21.52■■□□□ 1.04
CHERP-204ENST00000546538 TREHO43280 583 aa21.52■■□□□ 1.04
CHERP-204ENST00000546538 PARNO95453 639 aaKnown RBP21.52■■□□□ 1.04
CHERP-204ENST00000546538 KCNJ6P48051 423 aa21.52■■□□□ 1.04
CHERP-204ENST00000546538 CASC1Q6TDU7 716 aa21.52■■□□□ 1.04
CHERP-204ENST00000546538 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.52■■□□□ 1.04
CHERP-204ENST00000546538 TMEM87BQ96K49 555 aa21.52■■□□□ 1.04
CHERP-204ENST00000546538 BRWD1Q9NSI6 2320 aa21.51■■□□□ 1.03
CHERP-204ENST00000546538 ABHD14A-ACY1A0A1B0GW23 586 aa21.51■■□□□ 1.03
CHERP-204ENST00000546538 FIBPO43427 364 aa21.51■■□□□ 1.03
CHERP-204ENST00000546538 STAM2O75886 525 aa21.51■■□□□ 1.03
CHERP-204ENST00000546538 GJB5O95377 273 aa21.51■■□□□ 1.03
CHERP-204ENST00000546538 KIF5BP33176 963 aa21.51■■□□□ 1.03
CHERP-204ENST00000546538 LIFRP42702 1097 aa21.51■■□□□ 1.03
CHERP-204ENST00000546538 GRB10Q13322 594 aa21.51■■□□□ 1.03
CHERP-204ENST00000546538 GNPTABQ3T906 1256 aa21.51■■□□□ 1.03
CHERP-204ENST00000546538 C17orf102A2RUQ5 167 aa21.5■■□□□ 1.03
CHERP-204ENST00000546538 ATP9AO75110 1047 aa21.5■■□□□ 1.03
CHERP-204ENST00000546538 LGR5O75473 907 aa21.5■■□□□ 1.03
CHERP-204ENST00000546538 THPOP40225 353 aa21.5■■□□□ 1.03
CHERP-204ENST00000546538 ADAM17P78536 824 aa21.5■■□□□ 1.03
CHERP-204ENST00000546538 MRPS5P82675 430 aaKnown RBP21.5■■□□□ 1.03
CHERP-204ENST00000546538 DBF4BQ8NFT6 615 aa21.5■■□□□ 1.03
CHERP-204ENST00000546538 SMARCC2Q8TAQ2 1214 aa21.5■■□□□ 1.03
CHERP-204ENST00000546538 ATP6V0A1Q93050 837 aa21.5■■□□□ 1.03
CHERP-204ENST00000546538 LZTS2Q9BRK4 669 aa21.5■■□□□ 1.03
CHERP-204ENST00000546538 SETD4Q9NVD3 440 aa21.5■■□□□ 1.03
CHERP-204ENST00000546538 TCF20Q9UGU0 1960 aaKnown RBP21.5■■□□□ 1.03
CHERP-204ENST00000546538 KIF28PB7ZC32 967 aa21.49■■□□□ 1.03
CHERP-204ENST00000546538 ITGB5P18084 799 aa21.49■■□□□ 1.03
CHERP-204ENST00000546538 NEDD9Q14511 834 aa21.49■■□□□ 1.03
CHERP-204ENST00000546538 UBE2SQ16763 222 aa21.49■■□□□ 1.03
CHERP-204ENST00000546538 NFXL1Q6ZNB6 911 aa21.49■■□□□ 1.03
CHERP-204ENST00000546538 TMTC3Q6ZXV5 915 aa21.49■■□□□ 1.03
CHERP-204ENST00000546538 ADAMTS19Q8TE59 1207 aa21.49■■□□□ 1.03
CHERP-204ENST00000546538 CCDC69A6NI79 296 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 RSPH10B2B2RC85 870 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 NOP56O00567 594 aaKnown RBP21.48■■□□□ 1.03
CHERP-204ENST00000546538 RSPH10BP0C881 870 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 KCNA2P16389 499 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 SP4Q02446 784 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 PLEKHG4Q58EX7 1191 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 FAM117BQ6P1L5 589 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 SGMS1Q86VZ5 419 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 CCDC82Q8N4S0 544 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 NECAB3Q96P71 396 aaPredicted RBP21.48■■□□□ 1.03
CHERP-204ENST00000546538 SENP7Q9BQF6 1050 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 USP26Q9BXU7 913 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 ANO2Q9NQ90 1003 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 SEC63Q9UGP8 760 aaKnown RBP21.48■■□□□ 1.03
CHERP-204ENST00000546538 SIP14410 1827 aa21.48■■□□□ 1.03
CHERP-204ENST00000546538 LINC01553A4QN01 128 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 TNFRSF10AO00220 468 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 BMP1P13497 986 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 GNAQP50148 359 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 KCNQ1P51787 676 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 IKBKEQ14164 716 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 UTP14CQ5TAP6 766 aaKnown RBP21.47■■□□□ 1.03
CHERP-204ENST00000546538 TYW1BQ6NUM6 668 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 TMTC2Q8N394 836 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 FANCBQ8NB91 859 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 GDPD5Q8WTR4 605 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 LMBR1Q8WVP7 490 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 RAD9AQ99638 391 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 PSTPIP2Q9H939 334 aa21.47■■□□□ 1.03
CHERP-204ENST00000546538 CTSHP09668 335 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 FUT2Q10981 343 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 BMP2KLQ5H9B9 411 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 XRRA1Q6P2D8 792 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 MICU3Q86XE3 530 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 RASEFQ8IZ41 740 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 CUL5Q93034 780 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 TCEANC2Q96MN5 208 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 ZBED2Q9BTP6 218 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 SUGCTQ9HAC7 445 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 SLC12A7Q9Y666 1083 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 MTUS1Q9ULD2 1270 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 BRPF3Q9ULD4 1205 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 UBIAD1Q9Y5Z9 338 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 EMSYQ7Z589 1322 aa21.46■■□□□ 1.03
CHERP-204ENST00000546538 CNTNAP5Q8WYK1 1306 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms