RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 STK31Q9BXU1 1019 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 CD320Q9NPF0 282 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 YBX2Q9Y2T7 364 aaKnown RBP8.19□□□□□ -1.1
CCDC60-205ENST00000546345 MYBBP1AQ9BQG0 1328 aaKnown RBP8.19□□□□□ -1.1
CCDC60-205ENST00000546345 SALL1Q9NSC2 1324 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 ROBO3Q96MS0 1386 aa8.19□□□□□ -1.1
CCDC60-205ENST00000546345 TRIOO75962 3097 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 KBTBD13C9JR72 458 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 CPNE3O75131 537 aaKnown RBP8.18□□□□□ -1.1
CCDC60-205ENST00000546345 EDN3P14138 238 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 CAP2P40123 477 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 ADCYAP1R1P41586 468 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 AFF1P51825 1210 aaKnown RBP8.18□□□□□ -1.1
CCDC60-205ENST00000546345 RHBDL3P58872 404 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 ORC1Q13415 861 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 GRB14Q14449 540 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 LRRC41Q15345 812 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 RABL6Q3YEC7 729 aaPredicted RBP8.18□□□□□ -1.1
CCDC60-205ENST00000546345 METTL24Q5JXM2 366 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 ANKRD44Q8N8A2 993 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 KLHDC4Q8TBB5 520 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 WDR66Q8TBY9 1149 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 ZNF384Q8TF68 577 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 UBE2Q2Q8WVN8 375 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 FERMT2Q96AC1 680 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 ASB16Q96NS5 453 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 PAGR1Q9BTK6 254 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 OSBPL5Q9H0X9 879 aaPredicted RBP8.18□□□□□ -1.1
CCDC60-205ENST00000546345 DNAJC18Q9H819 358 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.18□□□□□ -1.1
CCDC60-205ENST00000546345 ZBED9Q6R2W3 1325 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 TET1Q8NFU7 2136 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 TECTAO75443 2155 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 C5orf42Q9H799 3197 aa8.18□□□□□ -1.1
CCDC60-205ENST00000546345 APAF1O14727 1248 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 ERC2O15083 957 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 SMNDC1O75940 238 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC60-205ENST00000546345 CNGA1P29973 690 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 IRS1P35568 1242 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 DDX10Q13206 875 aaKnown RBP8.17□□□□□ -1.1
CCDC60-205ENST00000546345 PICALMQ13492 652 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 PUM3Q15397 648 aaKnown RBP8.17□□□□□ -1.1
CCDC60-205ENST00000546345 TWISTNBQ3B726 338 aaPredicted RBP8.17□□□□□ -1.1
CCDC60-205ENST00000546345 TMEM240Q5SV17 173 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 MFSD14CQ5VZR4 134 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 EDC3Q96F86 508 aaKnown RBP8.17□□□□□ -1.1
CCDC60-205ENST00000546345 IPO9Q96P70 1041 aaKnown RBP8.17□□□□□ -1.1
CCDC60-205ENST00000546345 WDR18Q9BV38 432 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 PLVAPQ9BX97 442 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 DNAJC25Q9H1X3 360 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 RASSF4Q9H2L5 321 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 NKX2-4Q9H2Z4 354 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 TBX21Q9UL17 535 aa8.17□□□□□ -1.1
CCDC60-205ENST00000546345 SLC15A5A6NIM6 579 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 SPDYE3A6NKU9 549 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 EIF1AYO14602 144 aaKnown RBP8.16□□□□□ -1.1
CCDC60-205ENST00000546345 SEPT4O43236 478 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 TREHO43280 583 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 POLR3DP05423 398 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-205ENST00000546345 LDHBP07195 334 aaKnown RBP8.16□□□□□ -1.1
CCDC60-205ENST00000546345 NID1P14543 1247 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 RAG1P15918 1043 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 BACE1P56817 501 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 ATP11AP98196 1134 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 CACNA1BQ00975 2339 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 FAAP100Q0VG06 881 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 COL9A3Q14050 684 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-205ENST00000546345 CEP135Q66GS9 1140 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 GDF6Q6KF10 455 aaPredicted RBP8.16□□□□□ -1.1
CCDC60-205ENST00000546345 TRIM11Q96F44 468 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 BICC1Q9H694 974 aaKnown RBP8.16□□□□□ -1.1
CCDC60-205ENST00000546345 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCDC60-205ENST00000546345 NOP53Q9NZM5 478 aaKnown RBP8.16□□□□□ -1.1
CCDC60-205ENST00000546345 TACC3Q9Y6A5 838 aa8.16□□□□□ -1.1
CCDC60-205ENST00000546345 CACNA1HO95180 2353 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 LCTP09848 1927 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 NLRC5Q86WI3 1866 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 MROH7-TTC4A0A0A0MT08 1334 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 PI4K2BG5E9Z4 385 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 PQBP1O60828 265 aaKnown RBP8.15□□□□□ -1.1
CCDC60-205ENST00000546345 NBPF7P0C2Y1 421 aaPredicted RBP8.15□□□□□ -1.1
CCDC60-205ENST00000546345 BTDP43251 543 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 KCNMA1Q12791 1236 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 DSC3Q14574 896 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 GALNT12Q8IXK2 581 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 CACTIN-AS1Q8N1I8 211 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 ARRDC4Q8NCT1 418 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 ANKS1AQ92625 1134 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 SUV39H2Q9H5I1 410 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 DZANK1Q9NVP4 752 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 BTBD7Q9P203 1132 aa8.15□□□□□ -1.1
CCDC60-205ENST00000546345 A0A1W2PQ45 241 aaPredicted RBP8.14□□□□□ -1.11
CCDC60-205ENST00000546345 A0A1W2PQY0 241 aa8.14□□□□□ -1.11
CCDC60-205ENST00000546345 EPOPA6NHQ4 379 aa8.14□□□□□ -1.11
CCDC60-205ENST00000546345 PRR33A8MZF0 331 aa8.14□□□□□ -1.11
CCDC60-205ENST00000546345 SMIM22K7EJ46 135 aa8.14□□□□□ -1.11
CCDC60-205ENST00000546345 IFIT1P09914 478 aaKnown RBP8.14□□□□□ -1.11
CCDC60-205ENST00000546345 PHKA1P46020 1223 aa8.14□□□□□ -1.11
CCDC60-205ENST00000546345 CALD1Q05682 793 aaKnown RBP8.14□□□□□ -1.11
CCDC60-205ENST00000546345 CCDC27Q2M243 656 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms