RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 MYPNQ86TC9 1320 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 KLF18A0A0U1RQI7 1052 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 CYP2C8P10632 490 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 EPXP11678 715 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 BMP3P12645 472 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 ADH6P28332 368 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 HOXA7P31268 230 aaPredicted RBP7.37□□□□□ -1.23
PRKDC-211ENST00000546304 STAT2P52630 851 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 RCAN1P53805 252 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 HERVK_113P62684 666 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 MAP2K1Q02750 393 aaPredicted RBP7.37□□□□□ -1.23
PRKDC-211ENST00000546304 ZNF543Q08ER8 600 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 TROAPQ12815 778 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 CRHR2Q13324 411 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 GRM4Q14833 912 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 RABEP1Q15276 862 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 RTN1Q16799 776 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 SWI5Q1ZZU3 235 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 ASPRV1Q53RT3 343 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 GPATCH4Q5T3I0 446 aaKnown RBP7.37□□□□□ -1.23
PRKDC-211ENST00000546304 Q6ZUG5 572 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 FBXL16Q8N461 479 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 JMYQ8N9B5 988 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 NUP133Q8WUM0 1156 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 BRF1Q92994 677 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 CHMP4CQ96CF2 233 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 HSH2DQ96JZ2 352 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 KIF2CQ99661 725 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 SLF1Q9BQI6 1058 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 MYL10Q9BUA6 226 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 PDRG1Q9NUG6 133 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 FBXO28Q9NVF7 368 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 SAGE1Q9NXZ1 904 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 SLC12A7Q9Y666 1083 aa7.37□□□□□ -1.23
PRKDC-211ENST00000546304 DNMT3AQ9Y6K1 912 aaPredicted RBP7.37□□□□□ -1.23
PRKDC-211ENST00000546304 GOLGA8AA7E2F4 631 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 ZBTB43O43298 467 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 CA12O43570 354 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 ATG7O95352 703 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 PARP1P09874 1014 aaKnown RBP7.36□□□□□ -1.23
PRKDC-211ENST00000546304 CALM1P0DP23 149 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 CALM2P0DP24 149 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 CALM3P0DP25 149 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 RXRAP19793 462 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 KIF5BP33176 963 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 NEK4P51957 841 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 AK2P54819 239 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 APOBRQ0VD83 1088 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 IKQ13123 557 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-211ENST00000546304 TOB2Q14106 344 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-211ENST00000546304 CATSPERGQ6ZRH7 1159 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 KCTD1Q719H9 257 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 RAB11FIP4Q86YS3 637 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 TMTC2Q8N394 836 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 TMEM151AQ8N4L1 468 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 BEND7Q8N7W2 519 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-211ENST00000546304 CTCFLQ8NI51 663 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-211ENST00000546304 GTF3C2Q8WUA4 911 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-211ENST00000546304 ATG4CQ96DT6 458 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 CCDC97Q96F63 343 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-211ENST00000546304 RNF186Q9NXI6 227 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 KLF15Q9UIH9 416 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 FEM1BQ9UK73 627 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 BRPF3Q9ULD4 1205 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 ZMIZ1Q9ULJ6 1067 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 PPP1R9AQ9ULJ8 1098 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 NAP1L2Q9ULW6 460 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-211ENST00000546304 BRCA2P51587 3418 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 LCTP09848 1927 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 PLXNA1Q9UIW2 1896 aa7.36□□□□□ -1.23
PRKDC-211ENST00000546304 TMEM232C9JQI7 657 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 TLR2O60603 784 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 PLA2G6O60733 806 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 LGR5O75473 907 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 TRPA1O75762 1119 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 GOLGA8HP0CJ92 632 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 IRS1P35568 1242 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 GCLCP48506 637 aaPredicted RBP7.35□□□□□ -1.23
PRKDC-211ENST00000546304 METAP2P50579 478 aaKnown RBP eCLIP7.35□□□□□ -1.23
PRKDC-211ENST00000546304 TYRO3Q06418 890 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 ANKRD1Q15327 319 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 FAM110CQ1W6H9 321 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 SYDE2Q5VT97 1194 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 IER5Q5VY09 327 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 LBX2Q6XYB7 198 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 SYNE3Q6ZMZ3 975 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 NOL8Q76FK4 1167 aaKnown RBP7.35□□□□□ -1.23
PRKDC-211ENST00000546304 FAM160B2Q86V87 743 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 CCDC144CPQ8IYA2 1237 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 MB21D1Q8N884 522 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 MAP3K14Q99558 947 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 PAGR1Q9BTK6 254 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 ZFYVE28Q9HCC9 887 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 MAD2L2Q9UI95 211 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 PRR12Q9ULL5 1215 aa7.35□□□□□ -1.23
PRKDC-211ENST00000546304 CNTNAP5Q8WYK1 1306 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.34□□□□□ -1.23
PRKDC-211ENST00000546304 VWA5AO00534 786 aa7.34□□□□□ -1.23
PRKDC-211ENST00000546304 DHX16O60231 1041 aaKnown RBP7.34□□□□□ -1.23
PRKDC-211ENST00000546304 PLEKHA8P1O95397 391 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms