RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 GPR20Q99678 358 aa26.12■■□□□ 1.77
CHD4-214ENST00000545942 BRPF3Q9ULD4 1205 aa26.12■■□□□ 1.77
CHD4-214ENST00000545942 SPDYE3A6NKU9 549 aa26.11■■□□□ 1.77
CHD4-214ENST00000545942 CXCL10P02778 98 aa26.11■■□□□ 1.77
CHD4-214ENST00000545942 UBE2SQ16763 222 aa26.11■■□□□ 1.77
CHD4-214ENST00000545942 RTN1Q16799 776 aa26.11■■□□□ 1.77
CHD4-214ENST00000545942 WNT8BQ93098 351 aa26.11■■□□□ 1.77
CHD4-214ENST00000545942 GPRASP2Q96D09 838 aa26.11■■□□□ 1.77
CHD4-214ENST00000545942 CDHR1Q96JP9 859 aa26.11■■□□□ 1.77
CHD4-214ENST00000545942 CNTNAP5Q8WYK1 1306 aa26.1■■□□□ 1.77
CHD4-214ENST00000545942 C17orf102A2RUQ5 167 aa26.1■■□□□ 1.77
CHD4-214ENST00000545942 NBNO60934 754 aa26.1■■□□□ 1.77
CHD4-214ENST00000545942 SMIM10L2AP0DMW4 78 aa26.1■■□□□ 1.77
CHD4-214ENST00000545942 SMIM10L2BP0DMW5 78 aa26.1■■□□□ 1.77
CHD4-214ENST00000545942 ZNF618Q5T7W0 954 aa26.1■■□□□ 1.77
CHD4-214ENST00000545942 CNKSR3Q6P9H4 555 aa26.1■■□□□ 1.77
CHD4-214ENST00000545942 SERINC5Q86VE9 423 aa26.1■■□□□ 1.77
CHD4-214ENST00000545942 CA3P07451 260 aa26.09■■□□□ 1.77
CHD4-214ENST00000545942 HOXC8P31273 242 aa26.09■■□□□ 1.77
CHD4-214ENST00000545942 KCNJ6P48051 423 aa26.09■■□□□ 1.77
CHD4-214ENST00000545942 TRAF7Q6Q0C0 670 aa26.09■■□□□ 1.77
CHD4-214ENST00000545942 HERC6Q8IVU3 1022 aa26.09■■□□□ 1.77
CHD4-214ENST00000545942 USP38Q8NB14 1042 aa26.09■■□□□ 1.77
CHD4-214ENST00000545942 ATP6V0A1Q93050 837 aa26.09■■□□□ 1.77
CHD4-214ENST00000545942 ZNF215Q9UL58 517 aaPredicted RBP26.09■■□□□ 1.77
CHD4-214ENST00000545942 PCDHA6Q9UN73 950 aa26.09■■□□□ 1.77
CHD4-214ENST00000545942 PCDHA8Q9Y5H6 950 aa26.09■■□□□ 1.77
CHD4-214ENST00000545942 PRUNE2Q8WUY3 3088 aa26.08■■□□□ 1.77
CHD4-214ENST00000545942 KLF18A0A0U1RQI7 1052 aa26.08■■□□□ 1.77
CHD4-214ENST00000545942 KIF28PB7ZC32 967 aa26.08■■□□□ 1.77
CHD4-214ENST00000545942 ITGB5P18084 799 aa26.08■■□□□ 1.77
CHD4-214ENST00000545942 WDR5P61964 334 aaKnown RBP26.08■■□□□ 1.77
CHD4-214ENST00000545942 SP4Q02446 784 aa26.08■■□□□ 1.77
CHD4-214ENST00000545942 ADGRE1Q14246 886 aa26.08■■□□□ 1.77
CHD4-214ENST00000545942 WWC2Q6AWC2 1192 aa26.08■■□□□ 1.77
CHD4-214ENST00000545942 RNPEPQ9H4A4 650 aa26.08■■□□□ 1.77
CHD4-214ENST00000545942 EHMT1Q9H9B1 1298 aa26.08■■□□□ 1.77
CHD4-214ENST00000545942 CHD9Q3L8U1 2897 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 GBF1Q92538 1859 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 GOLGA8AA7E2F4 631 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 GOLGA8BA8MQT2 603 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 IGFBP4P22692 258 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 THPOP40225 353 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 RCAN1P53805 252 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 NAPAP54920 295 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 FGD1P98174 961 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 FUT2Q10981 343 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 TRIM50Q86XT4 487 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 TEX2Q8IWB9 1127 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 COL25A1Q9BXS0 654 aaPredicted RBP26.07■■□□□ 1.76
CHD4-214ENST00000545942 TELO2Q9Y4R8 837 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 UBIAD1Q9Y5Z9 338 aa26.07■■□□□ 1.76
CHD4-214ENST00000545942 TRIP12Q14669 1992 aaPredicted RBP26.06■■□□□ 1.76
CHD4-214ENST00000545942 GNAT1P11488 350 aa26.06■■□□□ 1.76
CHD4-214ENST00000545942 KCNA2P16389 499 aa26.06■■□□□ 1.76
CHD4-214ENST00000545942 MTMR1Q13613 665 aa26.06■■□□□ 1.76
CHD4-214ENST00000545942 UTP14CQ5TAP6 766 aaKnown RBP26.06■■□□□ 1.76
CHD4-214ENST00000545942 PPP1R18Q6NYC8 613 aa26.06■■□□□ 1.76
CHD4-214ENST00000545942 KCNB2Q92953 911 aa26.06■■□□□ 1.76
CHD4-214ENST00000545942 V9GY48 417 aaPredicted RBP26.06■■□□□ 1.76
CHD4-214ENST00000545942 EMSYQ7Z589 1322 aa26.06■■□□□ 1.76
CHD4-214ENST00000545942 ABHD14A-ACY1A0A1B0GW23 586 aa26.05■■□□□ 1.76
CHD4-214ENST00000545942 hCG_1984214I3L0E3 225 aa26.05■■□□□ 1.76
CHD4-214ENST00000545942 TREHO43280 583 aa26.05■■□□□ 1.76
CHD4-214ENST00000545942 EFCAB14O75071 495 aa26.05■■□□□ 1.76
CHD4-214ENST00000545942 ATP9AO75110 1047 aa26.05■■□□□ 1.76
CHD4-214ENST00000545942 MBTPS1Q14703 1052 aa26.05■■□□□ 1.76
CHD4-214ENST00000545942 ZNF713Q8N859 430 aaPredicted RBP26.05■■□□□ 1.76
CHD4-214ENST00000545942 PPM1EQ8WY54 764 aa26.05■■□□□ 1.76
CHD4-214ENST00000545942 RIC8AQ9NPQ8 531 aa26.05■■□□□ 1.76
CHD4-214ENST00000545942 TET1Q8NFU7 2136 aa26.04■■□□□ 1.76
CHD4-214ENST00000545942 RSPH10B2B2RC85 870 aa26.04■■□□□ 1.76
CHD4-214ENST00000545942 MAFGO15525 162 aa26.04■■□□□ 1.76
CHD4-214ENST00000545942 TLL1O43897 1013 aa26.04■■□□□ 1.76
CHD4-214ENST00000545942 RSPH10BP0C881 870 aa26.04■■□□□ 1.76
CHD4-214ENST00000545942 HSPA4P34932 840 aa26.04■■□□□ 1.76
CHD4-214ENST00000545942 TCF7P36402 384 aaPredicted RBP26.04■■□□□ 1.76
CHD4-214ENST00000545942 IKBKEQ14164 716 aa26.04■■□□□ 1.76
CHD4-214ENST00000545942 TYW1BQ6NUM6 668 aa26.04■■□□□ 1.76
CHD4-214ENST00000545942 JADE2Q9NQC1 790 aa26.04■■□□□ 1.76
CHD4-214ENST00000545942 FAM217BQ9NTX9 383 aaPredicted RBP26.04■■□□□ 1.76
CHD4-214ENST00000545942 SETD4Q9NVD3 440 aa26.04■■□□□ 1.76
CHD4-214ENST00000545942 NAP1L2Q9ULW6 460 aaPredicted RBP26.04■■□□□ 1.76
CHD4-214ENST00000545942 CAND2O75155 1236 aa26.03■■□□□ 1.76
CHD4-214ENST00000545942 LGR5O75473 907 aa26.03■■□□□ 1.76
CHD4-214ENST00000545942 CDC27P30260 824 aa26.03■■□□□ 1.76
CHD4-214ENST00000545942 TCTN1Q2MV58 587 aa26.03■■□□□ 1.76
CHD4-214ENST00000545942 SEPT1Q8WYJ6 367 aa26.03■■□□□ 1.76
CHD4-214ENST00000545942 JAKMIP1Q96N16 626 aaKnown RBP26.03■■□□□ 1.76
CHD4-214ENST00000545942 BARHL2Q9NY43 387 aa26.03■■□□□ 1.76
CHD4-214ENST00000545942 STXBP3O00186 592 aa26.02■■□□□ 1.76
CHD4-214ENST00000545942 FOSP01100 380 aaPredicted RBP26.02■■□□□ 1.76
CHD4-214ENST00000545942 CPA1P15085 419 aa26.02■■□□□ 1.76
CHD4-214ENST00000545942 METAP2P50579 478 aaKnown RBP eCLIP26.02■■□□□ 1.76
CHD4-214ENST00000545942 ADCY7P51828 1080 aa26.02■■□□□ 1.76
CHD4-214ENST00000545942 DEFB103AP81534 67 aa26.02■■□□□ 1.76
CHD4-214ENST00000545942 ZBED2Q9BTP6 218 aa26.02■■□□□ 1.76
CHD4-214ENST00000545942 PKD2L1Q9P0L9 805 aa26.02■■□□□ 1.76
CHD4-214ENST00000545942 SNX14Q9Y5W7 946 aa26.02■■□□□ 1.76
CHD4-214ENST00000545942 CCDC196A0A1B0GTZ2 297 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms