RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 SLC35F6Q8N357 371 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 SERPING1P05155 500 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 ANKRD20A4Q4UJ75 823 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 ANKRD20A8PQ5CZ79 823 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 ANKRD20A2Q5SQ80 823 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 ANKRD20A1Q5TYW2 823 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 DNAJC24Q6P3W2 148 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.66□□□□□ -0.38
CIT-217ENST00000545913 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 ARL4AP40617 200 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 LRRC63Q05C16 580 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 TBCKQ8TEA7 893 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 EEF2KMTQ96G04 330 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 PPP1R9AQ9ULJ8 1098 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 MAP3K4Q9Y6R4 1608 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 KCNQ3O43525 872 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 PRDM15P57071 1507 aaPredicted RBP12.66□□□□□ -0.38
CIT-217ENST00000545913 CDC37Q16543 378 aaPredicted RBP12.66□□□□□ -0.38
CIT-217ENST00000545913 PPWD1Q96BP3 646 aaKnown RBP12.66□□□□□ -0.38
CIT-217ENST00000545913 BMP3P12645 472 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 RBL2Q08999 1139 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 FMO2Q99518 471 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 SMIM24O75264 130 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 CC2D2BQ6DHV5 1058 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 APOL6Q9BWW8 343 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 PI4KBQ9UBF8 816 aa12.66□□□□□ -0.38
CIT-217ENST00000545913 TFAMQ00059 246 aaKnown RBP12.65□□□□□ -0.38
CIT-217ENST00000545913 TMCO4Q5TGY1 634 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 SCYL3Q8IZE3 742 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 WHAMMQ8TF30 809 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 TUBB6Q9BUF5 446 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 THAP9Q9H5L6 903 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 EPB41L5Q9HCM4 733 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 SLMAPQ14BN4 828 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 KCTD16Q68DU8 428 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 BZW1Q7L1Q6 419 aaKnown RBP12.65□□□□□ -0.38
CIT-217ENST00000545913 DCLK2Q8N568 766 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 CEP170P1Q96L14 293 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 CEP152O94986 1710 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 PDCD2Q16342 344 aaPredicted RBP12.65□□□□□ -0.38
CIT-217ENST00000545913 KLC3Q6P597 504 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 TTC25Q96NG3 672 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 TXLNGQ9NUQ3 528 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 DONSONQ9NYP3 566 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 ACTN1P12814 892 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 PHEXP78562 749 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 PKP1Q13835 747 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 RCN2Q14257 317 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 PSPC1Q8WXF1 523 aaKnown RBP12.65□□□□□ -0.38
CIT-217ENST00000545913 MAN1B1Q9UKM7 699 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 ATP8A1Q9Y2Q0 1164 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 TRPM1Q7Z4N2 1603 aa12.65□□□□□ -0.38
CIT-217ENST00000545913 ARAP3Q8WWN8 1544 aa12.65□□□□□ -0.39
CIT-217ENST00000545913 SLFN14P0C7P3 912 aa12.65□□□□□ -0.39
CIT-217ENST00000545913 ZSCAN20P17040 1043 aaPredicted RBP12.65□□□□□ -0.39
CIT-217ENST00000545913 DPCR1Q3MIW9 517 aa12.65□□□□□ -0.39
CIT-217ENST00000545913 RASEFQ8IZ41 740 aa12.65□□□□□ -0.39
CIT-217ENST00000545913 RPAP1Q9BWH6 1393 aaPredicted RBP12.65□□□□□ -0.39
CIT-217ENST00000545913 CASP2P42575 452 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 SYDE2Q5VT97 1194 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 SRRM1Q8IYB3 904 aaKnown RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 CCNYQ8ND76 341 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 NSUN7Q8NE18 718 aaKnown RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 ATP6V1E2Q96A05 226 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 LRRC4Q9HBW1 653 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 ZC3H15Q8WU90 426 aaKnown RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 FAM149B1Q96BN6 582 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 SRPRBQ9Y5M8 271 aaKnown RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 IQGAP3Q86VI3 1631 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 SPECC1L-ADORA2AF8WAN1 911 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 ARL6IP4Q66PJ3 421 aaKnown RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 DACT3Q96B18 629 aaPredicted RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 CALR3Q96L12 384 aaKnown RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 EIF3BP55884 814 aaKnown RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 TSTA3Q13630 321 aaPredicted RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 PANX2Q96RD6 677 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 PPME1Q9Y570 386 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 ADCK5Q3MIX3 580 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 KIF9Q9HAQ2 790 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 UBE2TQ9NPD8 197 aaPredicted RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 TLK1Q9UKI8 766 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 ENC1O14682 589 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 PRPSAP2O60256 369 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 KRT1P04264 644 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 IFT88Q13099 833 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 ARL13BQ3SXY8 428 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 DARS2Q6PI48 645 aaKnown RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 SMYD4Q8IYR2 804 aaPredicted RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
CIT-217ENST00000545913 NHEJ1Q9H9Q4 299 aaPredicted RBP12.64□□□□□ -0.39
CIT-217ENST00000545913 PSAPP07602 524 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 THOC5Q13769 683 aaKnown RBP12.63□□□□□ -0.39
CIT-217ENST00000545913 ALS2CLQ60I27 953 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 CALN1Q9BXU9 219 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 UBN1Q9NPG3 1134 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 GCKP35557 465 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 CUL1Q13616 776 aa12.63□□□□□ -0.39
CIT-217ENST00000545913 USPL1Q5W0Q7 1092 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms