RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 TRERF1Q96PN7 1200 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCAP-215ENST00000545718 LSM14BQ9BX40 385 aaKnown RBP17.28■□□□□ 0.36
SCAP-215ENST00000545718 UBXN6Q9BZV1 441 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 NCK2O43639 380 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 GCFC2P16383 781 aaKnown RBP17.28■□□□□ 0.36
SCAP-215ENST00000545718 TSGA10Q9BZW7 698 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 FAN1Q9Y2M0 1017 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCAP-215ENST00000545718 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
SCAP-215ENST00000545718 LRRIQ3A6PVS8 624 aaPredicted RBP17.28■□□□□ 0.36
SCAP-215ENST00000545718 MED24O75448 989 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 ALDH1B1P30837 517 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 HOXA13P31271 388 aaPredicted RBP17.28■□□□□ 0.36
SCAP-215ENST00000545718 PSMD2Q13200 908 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 HHIPL2Q6UWX4 724 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 PROM2Q8N271 834 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 EHD2Q9NZN4 543 aa17.28■□□□□ 0.36
SCAP-215ENST00000545718 RAPGEF1Q13905 1077 aa17.27■□□□□ 0.36
SCAP-215ENST00000545718 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.36
SCAP-215ENST00000545718 NFRKBQ6P4R8 1299 aa17.27■□□□□ 0.36
SCAP-215ENST00000545718 KRT27Q7Z3Y8 459 aa17.27■□□□□ 0.36
SCAP-215ENST00000545718 TRIM58Q8NG06 486 aa17.27■□□□□ 0.36
SCAP-215ENST00000545718 COG1Q8WTW3 980 aa17.27■□□□□ 0.36
SCAP-215ENST00000545718 KDM3AQ9Y4C1 1321 aa17.27■□□□□ 0.36
SCAP-215ENST00000545718 THSD7AQ9UPZ6 1657 aa17.27■□□□□ 0.36
SCAP-215ENST00000545718 ARHGAP4P98171 946 aa17.27■□□□□ 0.35
SCAP-215ENST00000545718 CCDC181Q5TID7 509 aa17.27■□□□□ 0.35
SCAP-215ENST00000545718 SLC30A10Q6XR72 485 aa17.27■□□□□ 0.35
SCAP-215ENST00000545718 SH2D4AQ9H788 454 aa17.27■□□□□ 0.35
SCAP-215ENST00000545718 EMILIN3Q9NT22 766 aa17.27■□□□□ 0.35
SCAP-215ENST00000545718 KLRG2A4D1S0 409 aaPredicted RBP17.26■□□□□ 0.35
SCAP-215ENST00000545718 SPDYE3A6NKU9 549 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 F5H6K3 240 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 PSMC6P62333 389 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 KLRC3Q07444 240 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 KCNMA1Q12791 1236 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 ADAM9Q13443 819 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 COL23A1Q86Y22 540 aaPredicted RBP17.26■□□□□ 0.35
SCAP-215ENST00000545718 ALS2CR12Q96Q35 445 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 MYH10P35580 1976 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 ZNF76P36508 570 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 NLGN1Q8N2Q7 840 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 BAP1Q92560 729 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 PLEKHA4Q9H4M7 779 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 PI4KBQ9UBF8 816 aa17.26■□□□□ 0.35
SCAP-215ENST00000545718 CYP11B2P19099 503 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 PDXDC1Q6P996 788 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 TDRD3Q9H7E2 651 aaKnown RBP17.25■□□□□ 0.35
SCAP-215ENST00000545718 JRKLQ9Y4A0 524 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 MYH7BA7E2Y1 1941 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 CDK17Q00537 523 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 EHHADHQ08426 723 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 FAM83BQ5T0W9 1011 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 SCFD1Q8WVM8 642 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 ZFP91Q96JP5 570 aaPredicted RBP17.25■□□□□ 0.35
SCAP-215ENST00000545718 SALL4Q9UJQ4 1053 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 SNX12Q9UMY4 172 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
SCAP-215ENST00000545718 ANO9A1A5B4 782 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 TULP1O00294 542 aaPredicted RBP17.25■□□□□ 0.35
SCAP-215ENST00000545718 HNRNPH2P55795 449 aaKnown RBP17.25■□□□□ 0.35
SCAP-215ENST00000545718 EZH2Q15910 746 aaKnown RBP17.25■□□□□ 0.35
SCAP-215ENST00000545718 SFMBT2Q5VUG0 894 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 TCERG1LQ5VWI1 586 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 CCDC70Q6NSX1 233 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 P2RX7Q99572 595 aaKnown RBP17.25■□□□□ 0.35
SCAP-215ENST00000545718 AMNQ9BXJ7 453 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 FAM198AQ9UFP1 575 aa17.25■□□□□ 0.35
SCAP-215ENST00000545718 MEIS2O14770 477 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 GH2P01242 217 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 NR2F2P24468 414 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 CASP5P51878 434 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 SLC7A5Q01650 507 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 SLC9C1Q4G0N8 1177 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 WDR93Q6P2C0 686 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 SH3BP5LQ7L8J4 393 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 FBXO11Q86XK2 927 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 CATSPER3Q86XQ3 398 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 CYP2W1Q8TAV3 490 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 IQCDQ96DY2 449 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 UBR3Q6ZT12 1888 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 ADAMTSL1Q8N6G6 1762 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 FAM170AA1A519 330 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 TUBBP07437 444 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 MYBL2P10244 700 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 HNRNPH3P31942 346 aaKnown RBP17.24■□□□□ 0.35
SCAP-215ENST00000545718 PDE6BP35913 854 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 MAP9Q49MG5 647 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 FAM133AQ8N9E0 248 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 ZDHHC15Q96MV8 337 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 ACBD3Q9H3P7 528 aa17.24■□□□□ 0.35
SCAP-215ENST00000545718 ONECUT3O60422 494 aaPredicted RBP17.23■□□□□ 0.35
SCAP-215ENST00000545718 NDUFB10O96000 172 aa17.23■□□□□ 0.35
SCAP-215ENST00000545718 RNASE9P60153 205 aaKnown RBP17.23■□□□□ 0.35
SCAP-215ENST00000545718 ZCWPW2Q504Y3 356 aa17.23■□□□□ 0.35
SCAP-215ENST00000545718 DCAF17Q5H9S7 520 aaPredicted RBP17.23■□□□□ 0.35
SCAP-215ENST00000545718 HAUS3Q68CZ6 603 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms