RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 KIF28PB7ZC32 967 aa22.82■■□□□ 1.24
CHD4-213ENST00000545584 UBE2SQ16763 222 aa22.82■■□□□ 1.24
CHD4-213ENST00000545584 GPRASP2Q96D09 838 aa22.82■■□□□ 1.24
CHD4-213ENST00000545584 GPR20Q99678 358 aa22.82■■□□□ 1.24
CHD4-213ENST00000545584 BCAS3Q9H6U6 928 aa22.82■■□□□ 1.24
CHD4-213ENST00000545584 ZNF215Q9UL58 517 aaPredicted RBP22.82■■□□□ 1.24
CHD4-213ENST00000545584 NAP1L2Q9ULW6 460 aaPredicted RBP22.82■■□□□ 1.24
CHD4-213ENST00000545584 KLF18A0A0U1RQI7 1052 aa22.81■■□□□ 1.24
CHD4-213ENST00000545584 GOLGA8AA7E2F4 631 aa22.81■■□□□ 1.24
CHD4-213ENST00000545584 GOLGA8BA8MQT2 603 aa22.81■■□□□ 1.24
CHD4-213ENST00000545584 ZNF200P98182 395 aaPredicted RBP22.81■■□□□ 1.24
CHD4-213ENST00000545584 ATP6V0A1Q93050 837 aa22.81■■□□□ 1.24
CHD4-213ENST00000545584 BRPF3Q9ULD4 1205 aa22.81■■□□□ 1.24
CHD4-213ENST00000545584 PCDHA6Q9UN73 950 aa22.81■■□□□ 1.24
CHD4-213ENST00000545584 PCDHA8Q9Y5H6 950 aa22.81■■□□□ 1.24
CHD4-213ENST00000545584 CNTNAP5Q8WYK1 1306 aa22.81■■□□□ 1.24
CHD4-213ENST00000545584 SMIM10L2AP0DMW4 78 aa22.8■■□□□ 1.24
CHD4-213ENST00000545584 SMIM10L2BP0DMW5 78 aa22.8■■□□□ 1.24
CHD4-213ENST00000545584 GNAT1P11488 350 aa22.8■■□□□ 1.24
CHD4-213ENST00000545584 MYOGP15173 224 aa22.8■■□□□ 1.24
CHD4-213ENST00000545584 RCAN1P53805 252 aa22.8■■□□□ 1.24
CHD4-213ENST00000545584 NAPAP54920 295 aa22.8■■□□□ 1.24
CHD4-213ENST00000545584 SP4Q02446 784 aa22.8■■□□□ 1.24
CHD4-213ENST00000545584 UTP14CQ5TAP6 766 aaKnown RBP22.8■■□□□ 1.24
CHD4-213ENST00000545584 CNKSR3Q6P9H4 555 aa22.8■■□□□ 1.24
CHD4-213ENST00000545584 TEX2Q8IWB9 1127 aa22.8■■□□□ 1.24
CHD4-213ENST00000545584 hCG_1984214I3L0E3 225 aa22.79■■□□□ 1.24
CHD4-213ENST00000545584 CXCL10P02778 98 aa22.79■■□□□ 1.24
CHD4-213ENST00000545584 TRIM71Q2Q1W2 868 aaKnown RBP22.79■■□□□ 1.24
CHD4-213ENST00000545584 ZNF618Q5T7W0 954 aa22.79■■□□□ 1.24
CHD4-213ENST00000545584 WWC2Q6AWC2 1192 aa22.79■■□□□ 1.24
CHD4-213ENST00000545584 PPP1R18Q6NYC8 613 aa22.79■■□□□ 1.24
CHD4-213ENST00000545584 SERINC5Q86VE9 423 aa22.79■■□□□ 1.24
CHD4-213ENST00000545584 HERC6Q8IVU3 1022 aa22.79■■□□□ 1.24
CHD4-213ENST00000545584 ZNF713Q8N859 430 aaPredicted RBP22.79■■□□□ 1.24
CHD4-213ENST00000545584 V9GY48 417 aaPredicted RBP22.79■■□□□ 1.24
CHD4-213ENST00000545584 TET1Q8NFU7 2136 aa22.79■■□□□ 1.24
CHD4-213ENST00000545584 CCDC196A0A1B0GTZ2 297 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 MAFGO15525 162 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 NBNO60934 754 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 REC8O95072 547 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 IGFBP4P22692 258 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 THPOP40225 353 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 MTMR1Q13613 665 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 GPNMBQ14956 572 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 JAKMIP1Q96N16 626 aaKnown RBP22.78■■□□□ 1.24
CHD4-213ENST00000545584 RNPEPQ9H4A4 650 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 UBIAD1Q9Y5Z9 338 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 EMSYQ7Z589 1322 aa22.78■■□□□ 1.24
CHD4-213ENST00000545584 ABHD14A-ACY1A0A1B0GW23 586 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 EFCAB14O75071 495 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 FOSP01100 380 aaPredicted RBP22.77■■□□□ 1.24
CHD4-213ENST00000545584 NEFLP07196 543 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 CA3P07451 260 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 ITGB5P18084 799 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 HSPA4P34932 840 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 ADCY7P51828 1080 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 IKBKEQ14164 716 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 HIC1Q14526 733 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 BLOC1S2Q6QNY1 142 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 KCNB2Q92953 911 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 WNT8BQ93098 351 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 GLT8D2Q9H1C3 349 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 RIC8AQ9NPQ8 531 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 JADE2Q9NQC1 790 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 DOCK5Q9H7D0 1870 aa22.77■■□□□ 1.24
CHD4-213ENST00000545584 RSPH10B2B2RC85 870 aa22.76■■□□□ 1.23
CHD4-213ENST00000545584 ATP9AO75110 1047 aa22.76■■□□□ 1.23
CHD4-213ENST00000545584 RSPH10BP0C881 870 aa22.76■■□□□ 1.23
CHD4-213ENST00000545584 KCNA2P16389 499 aa22.76■■□□□ 1.23
CHD4-213ENST00000545584 METAP2P50579 478 aaKnown RBP eCLIP22.76■■□□□ 1.23
CHD4-213ENST00000545584 WDR5P61964 334 aaKnown RBP22.76■■□□□ 1.23
CHD4-213ENST00000545584 FUT2Q10981 343 aa22.76■■□□□ 1.23
CHD4-213ENST00000545584 TRIM50Q86XT4 487 aa22.76■■□□□ 1.23
CHD4-213ENST00000545584 PPM1EQ8WY54 764 aa22.76■■□□□ 1.23
CHD4-213ENST00000545584 ZBED2Q9BTP6 218 aa22.76■■□□□ 1.23
CHD4-213ENST00000545584 PKD2L1Q9P0L9 805 aa22.76■■□□□ 1.23
CHD4-213ENST00000545584 CDH23Q9H251 3354 aa22.76■■□□□ 1.23
CHD4-213ENST00000545584 TREHO43280 583 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 TLL1O43897 1013 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 CAND2O75155 1236 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 LGR5O75473 907 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 HOXC8P31273 242 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 TCF7P36402 384 aaPredicted RBP22.75■■□□□ 1.23
CHD4-213ENST00000545584 TRAF7Q6Q0C0 670 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 Q6ZUG5 572 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 SEPT1Q8WYJ6 367 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 SETD4Q9NVD3 440 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 BARHL2Q9NY43 387 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 SNX14Q9Y5W7 946 aa22.75■■□□□ 1.23
CHD4-213ENST00000545584 SMCO2A6NFE2 343 aa22.74■■□□□ 1.23
CHD4-213ENST00000545584 CPA1P15085 419 aa22.74■■□□□ 1.23
CHD4-213ENST00000545584 PSMA5P28066 241 aa22.74■■□□□ 1.23
CHD4-213ENST00000545584 CDC27P30260 824 aa22.74■■□□□ 1.23
CHD4-213ENST00000545584 APOBRQ0VD83 1088 aa22.74■■□□□ 1.23
CHD4-213ENST00000545584 ADGRE1Q14246 886 aa22.74■■□□□ 1.23
CHD4-213ENST00000545584 TYW1BQ6NUM6 668 aa22.74■■□□□ 1.23
CHD4-213ENST00000545584 USP38Q8NB14 1042 aa22.74■■□□□ 1.23
CHD4-213ENST00000545584 FAM217BQ9NTX9 383 aaPredicted RBP22.74■■□□□ 1.23
CHD4-213ENST00000545584 TELO2Q9Y4R8 837 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms