RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 PSTPIP2Q9H939 334 aa24.3■■□□□ 1.48
SCARB1-210ENST00000545493 PCDHA11Q9Y5I1 949 aa24.3■■□□□ 1.48
SCARB1-210ENST00000545493 NBNO60934 754 aa24.29■■□□□ 1.48
SCARB1-210ENST00000545493 FUT2Q10981 343 aa24.29■■□□□ 1.48
SCARB1-210ENST00000545493 TYW1BQ6NUM6 668 aa24.29■■□□□ 1.48
SCARB1-210ENST00000545493 XRRA1Q6P2D8 792 aa24.29■■□□□ 1.48
SCARB1-210ENST00000545493 HEATR3Q7Z4Q2 680 aa24.29■■□□□ 1.48
SCARB1-210ENST00000545493 TRIM50Q86XT4 487 aa24.29■■□□□ 1.48
SCARB1-210ENST00000545493 SLC9A7Q96T83 725 aa24.29■■□□□ 1.48
SCARB1-210ENST00000545493 RBM28Q9NW13 759 aaKnown RBP24.29■■□□□ 1.48
SCARB1-210ENST00000545493 CUL9Q8IWT3 2517 aa24.29■■□□□ 1.48
SCARB1-210ENST00000545493 MUC3AQ02505 3323 aa24.28■■□□□ 1.48
SCARB1-210ENST00000545493 NOP56O00567 594 aaKnown RBP24.28■■□□□ 1.48
SCARB1-210ENST00000545493 ZBTB43O43298 467 aa24.28■■□□□ 1.48
SCARB1-210ENST00000545493 CXCL10P02778 98 aa24.28■■□□□ 1.48
SCARB1-210ENST00000545493 ADGRE1Q14246 886 aa24.28■■□□□ 1.48
SCARB1-210ENST00000545493 KRT32Q14532 448 aa24.28■■□□□ 1.48
SCARB1-210ENST00000545493 RTN1Q16799 776 aa24.28■■□□□ 1.48
SCARB1-210ENST00000545493 TCTN1Q2MV58 587 aa24.28■■□□□ 1.48
SCARB1-210ENST00000545493 CCDC136Q96JN2 1154 aa24.28■■□□□ 1.48
SCARB1-210ENST00000545493 SLC28A3Q9HAS3 691 aa24.28■■□□□ 1.48
SCARB1-210ENST00000545493 H3BRB1 525 aa24.27■■□□□ 1.48
SCARB1-210ENST00000545493 BAIAP3O94812 1187 aa24.27■■□□□ 1.48
SCARB1-210ENST00000545493 CPA1P15085 419 aa24.27■■□□□ 1.48
SCARB1-210ENST00000545493 MBTPS1Q14703 1052 aa24.27■■□□□ 1.48
SCARB1-210ENST00000545493 PPP2R2DQ66LE6 453 aa24.27■■□□□ 1.48
SCARB1-210ENST00000545493 SYNE3Q6ZMZ3 975 aa24.27■■□□□ 1.48
SCARB1-210ENST00000545493 KCNB2Q92953 911 aa24.27■■□□□ 1.48
SCARB1-210ENST00000545493 GPRASP2Q96D09 838 aa24.27■■□□□ 1.48
SCARB1-210ENST00000545493 SENP7Q9BQF6 1050 aa24.27■■□□□ 1.48
SCARB1-210ENST00000545493 TUT1Q9H6E5 874 aaKnown RBP24.27■■□□□ 1.48
SCARB1-210ENST00000545493 COL4A4P53420 1690 aaPredicted RBP24.27■■□□□ 1.48
SCARB1-210ENST00000545493 KLF18A0A0U1RQI7 1052 aa24.26■■□□□ 1.47
SCARB1-210ENST00000545493 GOLGA8AA7E2F4 631 aa24.26■■□□□ 1.47
SCARB1-210ENST00000545493 GOLGA8BA8MQT2 603 aa24.26■■□□□ 1.47
SCARB1-210ENST00000545493 SMIM10L2AP0DMW4 78 aa24.26■■□□□ 1.47
SCARB1-210ENST00000545493 SMIM10L2BP0DMW5 78 aa24.26■■□□□ 1.47
SCARB1-210ENST00000545493 KCNA2P16389 499 aa24.26■■□□□ 1.47
SCARB1-210ENST00000545493 ITGB5P18084 799 aa24.26■■□□□ 1.47
SCARB1-210ENST00000545493 ZNF618Q5T7W0 954 aa24.26■■□□□ 1.47
SCARB1-210ENST00000545493 NLRX1Q86UT6 975 aa24.26■■□□□ 1.47
SCARB1-210ENST00000545493 SERINC5Q86VE9 423 aa24.26■■□□□ 1.47
SCARB1-210ENST00000545493 GAS2L1Q99501 681 aaPredicted RBP24.26■■□□□ 1.47
SCARB1-210ENST00000545493 FAM217BQ9NTX9 383 aaPredicted RBP24.26■■□□□ 1.47
SCARB1-210ENST00000545493 C17orf102A2RUQ5 167 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 ATP9AO75110 1047 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 ARHGEF15O94989 841 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 CA3P07451 260 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 CDC27P30260 824 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 WDR5P61964 334 aaKnown RBP24.25■■□□□ 1.47
SCARB1-210ENST00000545493 SP4Q02446 784 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 PPP1R18Q6NYC8 613 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 CNKSR3Q6P9H4 555 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 PHOSPHO2Q8TCD6 241 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 PCDHA6Q9UN73 950 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 PCDHA8Q9Y5H6 950 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 UBIAD1Q9Y5Z9 338 aa24.25■■□□□ 1.47
SCARB1-210ENST00000545493 SPDYE3A6NKU9 549 aa24.24■■□□□ 1.47
SCARB1-210ENST00000545493 PARNO95453 639 aaKnown RBP24.24■■□□□ 1.47
SCARB1-210ENST00000545493 HSPA4P34932 840 aa24.24■■□□□ 1.47
SCARB1-210ENST00000545493 HERC6Q8IVU3 1022 aa24.24■■□□□ 1.47
SCARB1-210ENST00000545493 COL25A1Q9BXS0 654 aaPredicted RBP24.24■■□□□ 1.47
SCARB1-210ENST00000545493 USP26Q9BXU7 913 aa24.24■■□□□ 1.47
SCARB1-210ENST00000545493 SNX14Q9Y5W7 946 aa24.24■■□□□ 1.47
SCARB1-210ENST00000545493 NID2Q14112 1375 aa24.24■■□□□ 1.47
SCARB1-210ENST00000545493 SIP14410 1827 aa24.24■■□□□ 1.47
SCARB1-210ENST00000545493 MICAL3Q7RTP6 2002 aa24.23■■□□□ 1.47
SCARB1-210ENST00000545493 STXBP3O00186 592 aa24.23■■□□□ 1.47
SCARB1-210ENST00000545493 TREHO43280 583 aa24.23■■□□□ 1.47
SCARB1-210ENST00000545493 RCAN1P53805 252 aa24.23■■□□□ 1.47
SCARB1-210ENST00000545493 NAPAP54920 295 aa24.23■■□□□ 1.47
SCARB1-210ENST00000545493 DEFB103AP81534 67 aa24.23■■□□□ 1.47
SCARB1-210ENST00000545493 ATP6V0A1Q93050 837 aa24.23■■□□□ 1.47
SCARB1-210ENST00000545493 PGBD1Q96JS3 809 aa24.23■■□□□ 1.47
SCARB1-210ENST00000545493 RNPEPQ9H4A4 650 aa24.23■■□□□ 1.47
SCARB1-210ENST00000545493 MYO9BQ13459 2157 aa24.23■■□□□ 1.47
SCARB1-210ENST00000545493 HMGB1P09429 215 aaKnown RBP24.22■■□□□ 1.47
SCARB1-210ENST00000545493 UTP14CQ5TAP6 766 aaKnown RBP24.22■■□□□ 1.47
SCARB1-210ENST00000545493 TMCO2Q7Z6W1 182 aaPredicted RBP24.22■■□□□ 1.47
SCARB1-210ENST00000545493 CDHR1Q96JP9 859 aa24.22■■□□□ 1.47
SCARB1-210ENST00000545493 JAKMIP1Q96N16 626 aaKnown RBP24.22■■□□□ 1.47
SCARB1-210ENST00000545493 RIC8AQ9NPQ8 531 aa24.22■■□□□ 1.47
SCARB1-210ENST00000545493 PKD2L1Q9P0L9 805 aa24.22■■□□□ 1.47
SCARB1-210ENST00000545493 ZNF215Q9UL58 517 aaPredicted RBP24.22■■□□□ 1.47
SCARB1-210ENST00000545493 hCG_1984214I3L0E3 225 aa24.21■■□□□ 1.47
SCARB1-210ENST00000545493 TCF7P36402 384 aaPredicted RBP24.21■■□□□ 1.47
SCARB1-210ENST00000545493 THPOP40225 353 aa24.21■■□□□ 1.47
SCARB1-210ENST00000545493 KCNJ6P48051 423 aa24.21■■□□□ 1.47
SCARB1-210ENST00000545493 MTMR1Q13613 665 aa24.21■■□□□ 1.47
SCARB1-210ENST00000545493 ZNF713Q8N859 430 aaPredicted RBP24.21■■□□□ 1.47
SCARB1-210ENST00000545493 JADE2Q9NQC1 790 aa24.21■■□□□ 1.47
SCARB1-210ENST00000545493 EPOPA6NHQ4 379 aa24.2■■□□□ 1.46
SCARB1-210ENST00000545493 METAP2P50579 478 aaKnown RBP eCLIP24.2■■□□□ 1.46
SCARB1-210ENST00000545493 APOBRQ0VD83 1088 aa24.2■■□□□ 1.46
SCARB1-210ENST00000545493 Q6ZUG5 572 aa24.2■■□□□ 1.46
SCARB1-210ENST00000545493 SPRED2Q7Z698 418 aa24.2■■□□□ 1.46
SCARB1-210ENST00000545493 GIMAP8Q8ND71 665 aaPredicted RBP24.2■■□□□ 1.46
SCARB1-210ENST00000545493 LMBR1Q8WVP7 490 aa24.2■■□□□ 1.46
SCARB1-210ENST00000545493 ANO3Q9BYT9 981 aa24.2■■□□□ 1.46
SCARB1-210ENST00000545493 PRDM6Q9NQX0 595 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms