RNA–Protein interactions for RNA: ENST00000545276.1

LINC02440-201, Transcript of long intergenic non-protein coding RNA 2440, humanhuman

TSL 2 BASIC

Gene LINC02440, Length 680 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02440-201ENST00000545276 SCN5AQ14524 2016 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 CPLX1O14810 134 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 LGALS2P05162 132 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 GNA11P29992 359 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 PTGISQ16647 500 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 GDF6Q6KF10 455 aaPredicted RBP16.23■□□□□ 0.19
LINC02440-201ENST00000545276 CPLX2Q6PUV4 134 aaKnown RBP16.23■□□□□ 0.19
LINC02440-201ENST00000545276 PPP1R13LQ8WUF5 828 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 PGBD1Q96JS3 809 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 GPR20Q99678 358 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.23■□□□□ 0.19
LINC02440-201ENST00000545276 C16orf70Q9BSU1 422 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 ALG1Q9BT22 464 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 BCAS3Q9H6U6 928 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 IL23AQ9NPF7 189 aa16.23■□□□□ 0.19
LINC02440-201ENST00000545276 TRIP12Q14669 1992 aaPredicted RBP16.23■□□□□ 0.19
LINC02440-201ENST00000545276 CCL23P55773 120 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 BFSP2Q13515 415 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 ANKRD1Q15327 319 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 TMEM240Q5SV17 173 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 REXO1Q8N1G1 1221 aaKnown RBP16.22■□□□□ 0.19
LINC02440-201ENST00000545276 CCDC155Q8N6L0 562 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 CAGE1Q8TC20 777 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 BICD2Q8TD16 824 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 CTAGE1Q96RT6 745 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 MXRA8Q9BRK3 442 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 SH3GLB2Q9NR46 395 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 TMEM260Q9NX78 707 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 HDAC6Q9UBN7 1215 aa16.22■□□□□ 0.19
LINC02440-201ENST00000545276 H3BRB1 525 aa16.21■□□□□ 0.19
LINC02440-201ENST00000545276 ATP9AO75110 1047 aa16.21■□□□□ 0.19
LINC02440-201ENST00000545276 DEXIO95424 95 aa16.21■□□□□ 0.19
LINC02440-201ENST00000545276 PFKMP08237 780 aa16.21■□□□□ 0.19
LINC02440-201ENST00000545276 SMAD3P84022 425 aaKnown RBP16.21■□□□□ 0.19
LINC02440-201ENST00000545276 ARHGAP4P98171 946 aa16.21■□□□□ 0.19
LINC02440-201ENST00000545276 SSRP1Q08945 709 aaKnown RBP16.21■□□□□ 0.19
LINC02440-201ENST00000545276 CEP55Q53EZ4 464 aa16.21■□□□□ 0.19
LINC02440-201ENST00000545276 JAKMIP3Q5VZ66 844 aa16.21■□□□□ 0.19
LINC02440-201ENST00000545276 C16orf59Q7L2K0 433 aa16.21■□□□□ 0.19
LINC02440-201ENST00000545276 NIPA1Q7RTP0 329 aa16.21■□□□□ 0.19
LINC02440-201ENST00000545276 FAM177A1Q8N128 213 aaPredicted RBP16.21■□□□□ 0.19
LINC02440-201ENST00000545276 LARP6Q9BRS8 491 aaKnown RBP16.21■□□□□ 0.19
LINC02440-201ENST00000545276 TUT1Q9H6E5 874 aaKnown RBP16.21■□□□□ 0.19
LINC02440-201ENST00000545276 ZNF215Q9UL58 517 aaPredicted RBP16.21■□□□□ 0.19
LINC02440-201ENST00000545276 KAT6AQ92794 2004 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 CDKL5O76039 1030 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 HOXC8P31273 242 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 RFC2P35250 354 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 RBL2Q08999 1139 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 STK3Q13188 491 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 RASIP1Q5U651 963 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 ZNF365Q70YC5 407 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 RPUSD2Q8IZ73 545 aaKnown RBP16.2■□□□□ 0.18
LINC02440-201ENST00000545276 RETREG2Q8NC44 543 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 AFAP1L1Q8TED9 768 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 CRYGNQ8WXF5 182 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 SCLYQ96I15 445 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 SLKQ9H2G2 1235 aaPredicted RBP16.2■□□□□ 0.18
LINC02440-201ENST00000545276 MTIF3Q9H2K0 278 aaKnown RBP16.2■□□□□ 0.18
LINC02440-201ENST00000545276 KCNH7Q9NS40 1196 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 VPS54Q9P1Q0 977 aa16.2■□□□□ 0.18
LINC02440-201ENST00000545276 NFASCO94856 1347 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 MEIS1O00470 390 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 PFKFB2O60825 505 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 PPFIA3O75145 1194 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 SEC24BO95487 1268 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 CYP3A4P08684 503 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 ACRP10323 421 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 AK2P54819 239 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 SP4Q02446 784 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 SCRN1Q12765 414 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 PTK7Q13308 1070 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 FAM109BQ6ICB4 259 aaPredicted RBP16.19■□□□□ 0.18
LINC02440-201ENST00000545276 TRIM50Q86XT4 487 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 CYP2W1Q8TAV3 490 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 HERVK_113Q902F9 699 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 DHX38Q92620 1227 aaKnown RBP16.19■□□□□ 0.18
LINC02440-201ENST00000545276 JPH1Q9HDC5 661 aaPredicted RBP16.19■□□□□ 0.18
LINC02440-201ENST00000545276 TPCN1Q9ULQ1 816 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 STK36Q9NRP7 1315 aa16.19■□□□□ 0.18
LINC02440-201ENST00000545276 GBF1Q92538 1859 aa16.18■□□□□ 0.18
LINC02440-201ENST00000545276 IQCF3P0C7M6 154 aa16.18■□□□□ 0.18
LINC02440-201ENST00000545276 TCF7P36402 384 aaPredicted RBP16.18■□□□□ 0.18
LINC02440-201ENST00000545276 ZNF76P36508 570 aa16.18■□□□□ 0.18
LINC02440-201ENST00000545276 DEFB123Q8N688 67 aa16.18■□□□□ 0.18
LINC02440-201ENST00000545276 SEPT1Q8WYJ6 367 aa16.18■□□□□ 0.18
LINC02440-201ENST00000545276 SDF4Q9BRK5 362 aa16.18■□□□□ 0.18
LINC02440-201ENST00000545276 PKD2L1Q9P0L9 805 aa16.18■□□□□ 0.18
LINC02440-201ENST00000545276 TELO2Q9Y4R8 837 aa16.18■□□□□ 0.18
LINC02440-201ENST00000545276 EMSYQ7Z589 1322 aa16.18■□□□□ 0.18
LINC02440-201ENST00000545276 IGLV3-22A0A075B6J6 115 aa16.17■□□□□ 0.18
LINC02440-201ENST00000545276 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.17■□□□□ 0.18
LINC02440-201ENST00000545276 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.17■□□□□ 0.18
LINC02440-201ENST00000545276 C17orf102A2RUQ5 167 aa16.17■□□□□ 0.18
LINC02440-201ENST00000545276 ADAMTS3O15072 1205 aa16.17■□□□□ 0.18
LINC02440-201ENST00000545276 PARNO95453 639 aaKnown RBP16.17■□□□□ 0.18
LINC02440-201ENST00000545276 FGBP02675 491 aa16.17■□□□□ 0.18
LINC02440-201ENST00000545276 SMIM10L2AP0DMW4 78 aa16.17■□□□□ 0.18
LINC02440-201ENST00000545276 SMIM10L2BP0DMW5 78 aa16.17■□□□□ 0.18
LINC02440-201ENST00000545276 SELPP16109 830 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms