RNA–Protein interactions for RNA: ENST00000545223.1

PRKAB1-208, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 2

Gene PRKAB1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-208ENST00000545223 FBXO46Q6PJ61 603 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 CYFIP1Q7L576 1253 aa8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 NIPA1Q7RTP0 329 aa8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 LINC00301Q8NCQ3 95 aa8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 SLAIN1Q8ND83 568 aa8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 SP7Q8TDD2 431 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 SLC5A5Q92911 643 aa8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 GPRASP2Q96D09 838 aa8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 ZNF396Q96N95 335 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 CLIC6Q96NY7 704 aa8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 MPHOSPH6Q99547 160 aaKnown RBP8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 ZNF577Q9BSK1 485 aa8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 UNC93B1Q9H1C4 597 aa8.2□□□□□ -1.1
PRKAB1-208ENST00000545223 KIAA1217Q5T5P2 1943 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 MYH15Q9Y2K3 1946 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 MYADML2A6NDP7 307 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 PP2D1A8MPX8 630 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 IPO5O00410 1097 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 EML1O00423 815 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 CTAGE5O15320 804 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 DYNC1LI2O43237 492 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 CHMP2AO43633 222 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 PSMD10O75832 226 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 FARP2O94887 1054 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 BAG4O95429 457 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 GGPS1O95749 300 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 CCNE2O96020 404 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 OR52Z1P0C646 297 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 GCFC2P16383 781 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 CDC25AP30304 524 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 TECP42680 631 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 ATP2C1P98194 919 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 BEX3Q00994 111 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 ARHGAP1Q07960 439 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 SPIRE1Q08AE8 756 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 TTLL4Q14679 1199 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 SLC39A14Q15043 492 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 STK38Q15208 465 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 HSDL1Q3SXM5 330 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 GNPTABQ3T906 1256 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 SLC9C1Q4G0N8 1177 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 DUSP28Q4G0W2 176 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 TRMT44Q8IYL2 757 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 SCFD2Q8WU76 684 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 MCOLN1Q9GZU1 580 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 UNC45AQ9H3U1 944 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 TTC12Q9H892 705 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 POLR3EQ9NVU0 708 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 FBXO2Q9UK22 296 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 RCOR1Q9UKL0 485 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 FAM184BQ9ULE4 1060 aa8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 GNEQ9Y223 722 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-208ENST00000545223 A0A087WWV3 80 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 GSTTP1A0A1W2PQM5 241 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 VWA3AA6NCI4 1184 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 POTEMA6NI47 508 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 SPTLC2O15270 562 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 MAFGO15525 162 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 SEPT4O43236 478 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 MARCH6O60337 910 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 PGK1P00558 417 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 TGFB3P10600 412 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 CCL5P13501 91 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 AKR1A1P14550 325 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 SETQ01105 290 aaPredicted RBP8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 CELF3Q5SZQ8 465 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 LRCH2Q5VUJ6 765 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 LHX8Q68G74 356 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 B3GNT9Q6UX72 402 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 USP49Q70CQ1 688 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 DHX37Q8IY37 1157 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 OR6J1Q8NGC5 347 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 PPP1R13LQ8WUF5 828 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 AFG1LQ8WV93 481 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 LEO1Q8WVC0 666 aaPredicted RBP8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 ZNF333Q96JL9 665 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 NAP1L4Q99733 375 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 SENP7Q9BQF6 1050 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 MLXIPQ9HAP2 919 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 DDX20Q9UHI6 824 aaKnown RBP8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 VAV3Q9UKW4 847 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 PCDHA7Q9UN72 937 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 PCDHA12Q9UN75 941 aa8.18□□□□□ -1.1
PRKAB1-208ENST00000545223 TCHHQ07283 1943 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 RBAK-RBAKDNI3L0D1 243 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 DLL1O00548 723 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 TBX3O15119 743 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 GAS7O60861 476 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 ADAMTS4O75173 837 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 GADD45BO75293 160 aaPredicted RBP8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 YEATS4O95619 227 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 GH1P01241 217 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 KRT85P78386 507 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 ORC2Q13416 577 aaPredicted RBP8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 NEDD9Q14511 834 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 PKN2Q16513 984 aaKnown RBP8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 ECM1Q16610 540 aa8.17□□□□□ -1.1
PRKAB1-208ENST00000545223 HABP4Q5JVS0 413 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms