RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 TOB2Q14106 344 aaPredicted RBP19.39■□□□□ 0.69
HOXD8-204ENST00000544999 ZNF697Q5TEC3 545 aa19.39■□□□□ 0.69
HOXD8-204ENST00000544999 CCDC155Q8N6L0 562 aa19.39■□□□□ 0.69
HOXD8-204ENST00000544999 RETREG2Q8NC44 543 aa19.39■□□□□ 0.69
HOXD8-204ENST00000544999 GIMAP8Q8ND71 665 aaPredicted RBP19.39■□□□□ 0.69
HOXD8-204ENST00000544999 CAGE1Q8TC20 777 aa19.39■□□□□ 0.69
HOXD8-204ENST00000544999 CTAGE1Q96RT6 745 aa19.39■□□□□ 0.69
HOXD8-204ENST00000544999 MTIF3Q9H2K0 278 aaKnown RBP19.39■□□□□ 0.69
HOXD8-204ENST00000544999 MTMR10Q9NXD2 777 aa19.39■□□□□ 0.69
HOXD8-204ENST00000544999 TANC1Q9C0D5 1861 aa19.39■□□□□ 0.69
HOXD8-204ENST00000544999 LGALS2P05162 132 aa19.38■□□□□ 0.69
HOXD8-204ENST00000544999 PFKMP08237 780 aa19.38■□□□□ 0.69
HOXD8-204ENST00000544999 PDIA3P30101 505 aaKnown RBP19.38■□□□□ 0.69
HOXD8-204ENST00000544999 RFC2P35250 354 aa19.38■□□□□ 0.69
HOXD8-204ENST00000544999 CLK2P49760 499 aaKnown RBP19.38■□□□□ 0.69
HOXD8-204ENST00000544999 AP3B2Q13367 1082 aa19.38■□□□□ 0.69
HOXD8-204ENST00000544999 GPR20Q99678 358 aa19.38■□□□□ 0.69
HOXD8-204ENST00000544999 ANO3Q9BYT9 981 aa19.38■□□□□ 0.69
HOXD8-204ENST00000544999 JADE2Q9NQC1 790 aa19.38■□□□□ 0.69
HOXD8-204ENST00000544999 SZT2Q5T011 3432 aa19.37■□□□□ 0.69
HOXD8-204ENST00000544999 ESYT2A0FGR8 921 aa19.37■□□□□ 0.69
HOXD8-204ENST00000544999 MAFGO15525 162 aa19.37■□□□□ 0.69
HOXD8-204ENST00000544999 IQCF3P0C7M6 154 aa19.37■□□□□ 0.69
HOXD8-204ENST00000544999 KCNA2P16389 499 aa19.37■□□□□ 0.69
HOXD8-204ENST00000544999 AKAP17AQ02040 695 aaKnown RBP19.37■□□□□ 0.69
HOXD8-204ENST00000544999 MTMR1Q13613 665 aa19.37■□□□□ 0.69
HOXD8-204ENST00000544999 NTRK3Q16288 839 aa19.37■□□□□ 0.69
HOXD8-204ENST00000544999 PKN1Q16512 942 aa19.37■□□□□ 0.69
HOXD8-204ENST00000544999 CCDC12Q8WUD4 166 aaPredicted RBP19.37■□□□□ 0.69
HOXD8-204ENST00000544999 RNF26Q9BY78 433 aaPredicted RBP19.37■□□□□ 0.69
HOXD8-204ENST00000544999 SCN5AQ14524 2016 aa19.37■□□□□ 0.69
HOXD8-204ENST00000544999 TRIP12Q14669 1992 aaPredicted RBP19.36■□□□□ 0.69
HOXD8-204ENST00000544999 TMEM265A0A087WTH1 108 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 H3BRB1 525 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 ATP9AO75110 1047 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 IFNAR1P17181 557 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 CCT2P78371 535 aaKnown RBP19.36■□□□□ 0.69
HOXD8-204ENST00000544999 RBL2Q08999 1139 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 AFAP1L1Q8TED9 768 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 DHX38Q92620 1227 aaKnown RBP19.36■□□□□ 0.69
HOXD8-204ENST00000544999 PHKBQ93100 1093 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 VWCEQ96DN2 955 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 PGBD1Q96JS3 809 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 MXRA8Q9BRK3 442 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 UPF3BQ9BZI7 483 aaKnown RBP19.36■□□□□ 0.69
HOXD8-204ENST00000544999 ZMYND12Q9H0C1 365 aa19.36■□□□□ 0.69
HOXD8-204ENST00000544999 TUT1Q9H6E5 874 aaKnown RBP19.36■□□□□ 0.69
HOXD8-204ENST00000544999 PTK7Q13308 1070 aa19.35■□□□□ 0.69
HOXD8-204ENST00000544999 OTOP2Q7RTS6 562 aa19.35■□□□□ 0.69
HOXD8-204ENST00000544999 ZNF274Q96GC6 653 aaPredicted RBP19.35■□□□□ 0.69
HOXD8-204ENST00000544999 PDRG1Q9NUG6 133 aa19.35■□□□□ 0.69
HOXD8-204ENST00000544999 TMEM260Q9NX78 707 aa19.35■□□□□ 0.69
HOXD8-204ENST00000544999 EIF5BO60841 1220 aaKnown RBP19.34■□□□□ 0.69
HOXD8-204ENST00000544999 SREBF1P36956 1147 aa19.34■□□□□ 0.69
HOXD8-204ENST00000544999 MCTP2Q6DN12 878 aa19.34■□□□□ 0.69
HOXD8-204ENST00000544999 DEFB128Q7Z7B8 93 aa19.34■□□□□ 0.69
HOXD8-204ENST00000544999 SLC26A6Q9BXS9 759 aa19.34■□□□□ 0.69
HOXD8-204ENST00000544999 NCOA5Q9HCD5 579 aaKnown RBP19.34■□□□□ 0.69
HOXD8-204ENST00000544999 C6orf50Q9HD87 102 aa19.34■□□□□ 0.69
HOXD8-204ENST00000544999 CXXC1Q9P0U4 656 aaPredicted RBP19.34■□□□□ 0.69
HOXD8-204ENST00000544999 ZNF215Q9UL58 517 aaPredicted RBP19.34■□□□□ 0.69
HOXD8-204ENST00000544999 TELO2Q9Y4R8 837 aa19.34■□□□□ 0.69
HOXD8-204ENST00000544999 C17orf102A2RUQ5 167 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 PARNO95453 639 aaKnown RBP19.33■□□□□ 0.68
HOXD8-204ENST00000544999 SMIM10L2AP0DMW4 78 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 SMIM10L2BP0DMW5 78 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 SELPP16109 830 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 DNAJB2P25686 324 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 GNA11P29992 359 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 HOXC8P31273 242 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 ANAPC15P60006 121 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 SP4Q02446 784 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 CEP55Q53EZ4 464 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 UTP14CQ5TAP6 766 aaKnown RBP19.33■□□□□ 0.68
HOXD8-204ENST00000544999 JAKMIP3Q5VZ66 844 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 LRRC8DQ7L1W4 858 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 CCDC148Q8NFR7 591 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 SEPT1Q8WYJ6 367 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 FAM161BQ96MY7 647 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 SEMA6BQ9H3T3 888 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 STXBP5LQ9Y2K9 1186 aa19.33■□□□□ 0.68
HOXD8-204ENST00000544999 CKBP12277 381 aa19.32■□□□□ 0.68
HOXD8-204ENST00000544999 ACTN1P12814 892 aa19.32■□□□□ 0.68
HOXD8-204ENST00000544999 TCF7P36402 384 aaPredicted RBP19.32■□□□□ 0.68
HOXD8-204ENST00000544999 ARHGAP4P98171 946 aa19.32■□□□□ 0.68
HOXD8-204ENST00000544999 ZNF200P98182 395 aaPredicted RBP19.32■□□□□ 0.68
HOXD8-204ENST00000544999 HIC1Q14526 733 aa19.32■□□□□ 0.68
HOXD8-204ENST00000544999 TRIM71Q2Q1W2 868 aaKnown RBP19.32■□□□□ 0.68
HOXD8-204ENST00000544999 TRIM50Q86XT4 487 aa19.32■□□□□ 0.68
HOXD8-204ENST00000544999 GUCD1Q96NT3 240 aa19.32■□□□□ 0.68
HOXD8-204ENST00000544999 TTYH1Q9H313 450 aaPredicted RBP19.32■□□□□ 0.68
HOXD8-204ENST00000544999 KCNH7Q9NS40 1196 aa19.32■□□□□ 0.68
HOXD8-204ENST00000544999 PKD2L1Q9P0L9 805 aa19.32■□□□□ 0.68
HOXD8-204ENST00000544999 NFASCO94856 1347 aa19.31■□□□□ 0.68
HOXD8-204ENST00000544999 GSTTP1A0A1W2PQM5 241 aa19.31■□□□□ 0.68
HOXD8-204ENST00000544999 ZBBXA8MT70 800 aa19.31■□□□□ 0.68
HOXD8-204ENST00000544999 GRXCR1A8MXD5 290 aa19.31■□□□□ 0.68
HOXD8-204ENST00000544999 CYP3A4P08684 503 aa19.31■□□□□ 0.68
HOXD8-204ENST00000544999 SSRP1Q08945 709 aaKnown RBP19.31■□□□□ 0.68
HOXD8-204ENST00000544999 NIPA1Q7RTP0 329 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms