RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 RBM28Q9NW13 759 aaKnown RBP14.35□□□□□ -0.11
ACTN1-206ENST00000544964 THEGQ9P2T0 379 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 GTF2IRD1Q9UHL9 959 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 NOD1Q9Y239 953 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 MICAL3Q7RTP6 2002 aa14.35□□□□□ -0.11
ACTN1-206ENST00000544964 EPOPA6NHQ4 379 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 HAS3O00219 553 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 CYTH3O43739 400 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 PFKFB2O60825 505 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 PPFIA3O75145 1194 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 ACTN1P12814 892 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 HOXA13P31271 388 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-206ENST00000544964 CCDC85BQ15834 202 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-206ENST00000544964 DGKDQ16760 1214 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 HOMER1Q86YM7 354 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 NECAB1Q8N987 351 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 RETREG2Q8NC44 543 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 AFAP1L1Q8TED9 768 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 SYMPKQ92797 1274 aaKnown RBP14.34□□□□□ -0.11
ACTN1-206ENST00000544964 WNT8BQ93098 351 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 PIGSQ96S52 555 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 SLKQ9H2G2 1235 aaPredicted RBP14.34□□□□□ -0.11
ACTN1-206ENST00000544964 RIOX1Q9H6W3 641 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 LIMCH1Q9UPQ0 1083 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 MRVI1Q9Y6F6 885 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 FRMPD4Q14CM0 1322 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 NID2Q14112 1375 aa14.34□□□□□ -0.11
ACTN1-206ENST00000544964 hCG_1642624A0A1W2PR95 340 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 DTNBO60941 627 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 BAIAP3O94812 1187 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 SCRN1Q12765 414 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 PGM5Q15124 567 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 TCTN1Q2MV58 587 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 TRIM71Q2Q1W2 868 aaKnown RBP14.33□□□□□ -0.12
ACTN1-206ENST00000544964 TRAF7Q6Q0C0 670 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 LRRC8DQ7L1W4 858 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 SPRED2Q7Z698 418 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 HERC6Q8IVU3 1022 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 PHOSPHO2Q8TCD6 241 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 ATXN2LQ8WWM7 1075 aaKnown RBP14.33□□□□□ -0.12
ACTN1-206ENST00000544964 LZTS2Q9BRK4 669 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 HDAC6Q9UBN7 1215 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 PCDHA1Q9Y5I3 950 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 SIP14410 1827 aa14.33□□□□□ -0.12
ACTN1-206ENST00000544964 TCF20Q9UGU0 1960 aaKnown RBP14.33□□□□□ -0.12
ACTN1-206ENST00000544964 CCDC196A0A1B0GTZ2 297 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 NBNO60934 754 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 CXCL10P02778 98 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 CKBP12277 381 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 SELPP16109 830 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 UBA1P22314 1058 aaKnown RBP14.32□□□□□ -0.12
ACTN1-206ENST00000544964 PSEN2P49810 448 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 WDR5P61964 334 aaKnown RBP14.32□□□□□ -0.12
ACTN1-206ENST00000544964 SP2Q02086 613 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 TAP1Q03518 808 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 LAMC2Q13753 1193 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 HIC1Q14526 733 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 MFSD10Q14728 455 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 HSDL1Q3SXM5 330 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 VSIG10LQ86VR7 867 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 CCDC155Q8N6L0 562 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 GPKOWQ92917 476 aaPredicted RBP eCLIP14.32□□□□□ -0.12
ACTN1-206ENST00000544964 ASB2Q96Q27 587 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 SPZ1Q9BXG8 430 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 FTOQ9C0B1 505 aaKnown RBP eCLIP14.32□□□□□ -0.12
ACTN1-206ENST00000544964 MAP3K20Q9NYL2 800 aaKnown RBP14.32□□□□□ -0.12
ACTN1-206ENST00000544964 CNTNAP5Q8WYK1 1306 aa14.32□□□□□ -0.12
ACTN1-206ENST00000544964 RFXAPO00287 272 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 SORBS3O60504 671 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 MYCLP12524 364 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-206ENST00000544964 POU3F3P20264 500 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-206ENST00000544964 SMARCA1P28370 1054 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 FUT2Q10981 343 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 ST3GAL1Q11201 340 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 MBTPS1Q14703 1052 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 NTRK3Q16288 839 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 KIAA0753Q2KHM9 967 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 CELF3Q5SZQ8 465 aaKnown RBP14.31□□□□□ -0.12
ACTN1-206ENST00000544964 MYSM1Q5VVJ2 828 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 TMCO2Q7Z6W1 182 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-206ENST00000544964 DHX37Q8IY37 1157 aaKnown RBP14.31□□□□□ -0.12
ACTN1-206ENST00000544964 SAMD3Q8N6K7 520 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 PHKBQ93100 1093 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 GTF3C6Q969F1 213 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 RRP36Q96EU6 259 aaKnown RBP14.31□□□□□ -0.12
ACTN1-206ENST00000544964 ZSCAN31Q96LW9 406 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-206ENST00000544964 ALG1Q9BT22 464 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 KATNAL1Q9BW62 490 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 CERS4Q9HA82 394 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 MTCH2Q9Y6C9 303 aa14.31□□□□□ -0.12
ACTN1-206ENST00000544964 LCHNA4D1U4 455 aa14.3□□□□□ -0.12
ACTN1-206ENST00000544964 CPLX1O14810 134 aa14.3□□□□□ -0.12
ACTN1-206ENST00000544964 GGPS1O95749 300 aa14.3□□□□□ -0.12
ACTN1-206ENST00000544964 DEFB103AP81534 67 aa14.3□□□□□ -0.12
ACTN1-206ENST00000544964 ZNF200P98182 395 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-206ENST00000544964 PTK7Q13308 1070 aa14.3□□□□□ -0.12
ACTN1-206ENST00000544964 KRT40Q6A162 431 aa14.3□□□□□ -0.12
ACTN1-206ENST00000544964 CCDC83Q8IWF9 413 aa14.3□□□□□ -0.12
ACTN1-206ENST00000544964 MICALL1Q8N3F8 863 aa14.3□□□□□ -0.12
ACTN1-206ENST00000544964 C7orf31Q8N865 590 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms