RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 IRS1P35568 1242 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 ANTXR2P58335 489 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 CASC1Q6TDU7 716 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.75■□□□□ 0.59
DDX55-212ENST00000544738 PABPC5Q96DU9 382 aaKnown RBP18.75■□□□□ 0.59
DDX55-212ENST00000544738 PIGSQ96S52 555 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 ESYT1Q9BSJ8 1104 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 LSG1Q9H089 658 aaKnown RBP18.75■□□□□ 0.59
DDX55-212ENST00000544738 SENP2Q9HC62 589 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 CLDND1Q9NY35 253 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 MUTYHQ9UIF7 546 aa18.75■□□□□ 0.59
DDX55-212ENST00000544738 ZFHX2Q9C0A1 2572 aaPredicted RBP18.74■□□□□ 0.59
DDX55-212ENST00000544738 ARIH2O95376 493 aa18.74■□□□□ 0.59
DDX55-212ENST00000544738 KIF5BP33176 963 aa18.74■□□□□ 0.59
DDX55-212ENST00000544738 MCM5P33992 734 aa18.74■□□□□ 0.59
DDX55-212ENST00000544738 GPM6BQ13491 265 aa18.74■□□□□ 0.59
DDX55-212ENST00000544738 EPC2Q52LR7 807 aa18.74■□□□□ 0.59
DDX55-212ENST00000544738 TIGD5Q53EQ6 642 aa18.74■□□□□ 0.59
DDX55-212ENST00000544738 BMP2KLQ5H9B9 411 aa18.74■□□□□ 0.59
DDX55-212ENST00000544738 MYOCDQ8IZQ8 938 aa18.74■□□□□ 0.59
DDX55-212ENST00000544738 CTCFLQ8NI51 663 aaPredicted RBP18.74■□□□□ 0.59
DDX55-212ENST00000544738 AFG1LQ8WV93 481 aa18.74■□□□□ 0.59
DDX55-212ENST00000544738 GCOM1H8Y6P7 765 aaPredicted RBP18.73■□□□□ 0.59
DDX55-212ENST00000544738 CYTH3O43739 400 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 DDAH1O94760 285 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 POLR2MP0CAP2 368 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 CLUL1Q15846 466 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 LY6KQ17RY6 165 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 SLC35G1Q2M3R5 365 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 IER5LQ5T953 404 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 KCNV1Q6PIU1 500 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 PRSS33Q8NF86 280 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 TMEM87BQ96K49 555 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 PDCD2LQ9BRP1 358 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 TANC1Q9C0D5 1861 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 MYO7AQ13402 2215 aa18.73■□□□□ 0.59
DDX55-212ENST00000544738 PRC1O43663 620 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 AMHP03971 560 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 CASTP20810 708 aaKnown RBP18.72■□□□□ 0.59
DDX55-212ENST00000544738 SMARCA1P28370 1054 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 PTPN5P54829 565 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 ARHGAP1Q07960 439 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 SESTD1Q86VW0 696 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 ZNF654Q8IZM8 581 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 C7orf31Q8N865 590 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 LZTS2Q9BRK4 669 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 LY9Q9HBG7 655 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 ANO2Q9NQ90 1003 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 HDAC6Q9UBN7 1215 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 DDX41Q9UJV9 622 aaKnown RBP18.72■□□□□ 0.59
DDX55-212ENST00000544738 MRVI1Q9Y6F6 885 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 ZDBF2Q9HCK1 2354 aa18.72■□□□□ 0.59
DDX55-212ENST00000544738 SLC27A2O14975 620 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 MMP3P08254 477 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 MYCLP12524 364 aaPredicted RBP18.71■□□□□ 0.59
DDX55-212ENST00000544738 HOXA13P31271 388 aaPredicted RBP18.71■□□□□ 0.59
DDX55-212ENST00000544738 GNAQP50148 359 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 LAMC2Q13753 1193 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 PGM5Q15124 567 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 NECTIN1Q15223 517 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 DGKDQ16760 1214 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 ZNF618Q5T7W0 954 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 NFXL1Q6ZNB6 911 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 VSIG10LQ86VR7 867 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 KAT2BQ92831 832 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 EMID1Q96A84 441 aaPredicted RBP18.71■□□□□ 0.59
DDX55-212ENST00000544738 ALG1Q9BT22 464 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 SPZ1Q9BXG8 430 aa18.71■□□□□ 0.59
DDX55-212ENST00000544738 NSUN3Q9H649 340 aaKnown RBP18.71■□□□□ 0.59
DDX55-212ENST00000544738 KIAA1217Q5T5P2 1943 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 CCDC69A6NI79 296 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 H3BNC9 293 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 LGR5O75473 907 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 CALM1P0DP23 149 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 CALM2P0DP24 149 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 CALM3P0DP25 149 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 TGFB3P10600 412 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 PTPRZ1P23471 2315 aaPredicted RBP18.7■□□□□ 0.58
DDX55-212ENST00000544738 LIFRP42702 1097 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 RBL2Q08999 1139 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 HERC4Q5GLZ8 1057 aaPredicted RBP18.7■□□□□ 0.58
DDX55-212ENST00000544738 RNF20Q5VTR2 975 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 CREB3L3Q68CJ9 461 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 RNF135Q8IUD6 432 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 DHX37Q8IY37 1157 aaKnown RBP18.7■□□□□ 0.58
DDX55-212ENST00000544738 PBXIP1Q96AQ6 731 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 RRP36Q96EU6 259 aaKnown RBP18.7■□□□□ 0.58
DDX55-212ENST00000544738 SAMD11Q96NU1 681 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 GTF2IRD1Q9UHL9 959 aa18.7■□□□□ 0.58
DDX55-212ENST00000544738 SH2B2O14492 632 aaPredicted RBP18.69■□□□□ 0.58
DDX55-212ENST00000544738 UPP2O95045 317 aa18.69■□□□□ 0.58
DDX55-212ENST00000544738 CCND2P30279 289 aa18.69■□□□□ 0.58
DDX55-212ENST00000544738 HTRA4P83105 476 aaPredicted RBP18.69■□□□□ 0.58
DDX55-212ENST00000544738 MBTPS1Q14703 1052 aa18.69■□□□□ 0.58
DDX55-212ENST00000544738 RPAINQ86UA6 219 aa18.69■□□□□ 0.58
DDX55-212ENST00000544738 FCHSD1Q86WN1 690 aa18.69■□□□□ 0.58
DDX55-212ENST00000544738 TMEM192Q8IY95 271 aa18.69■□□□□ 0.58
DDX55-212ENST00000544738 DBF4BQ8NFT6 615 aa18.69■□□□□ 0.58
DDX55-212ENST00000544738 PPTC7Q8NI37 304 aa18.69■□□□□ 0.58
DDX55-212ENST00000544738 EDAQ92838 391 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms