RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	SAMD15	Q9P1V8	674 aa		7.61	□□□□□ -1.19
LEMD3-205	ENST00000544506	FAM83G	A6ND36	823 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	N4BP3	O15049	544 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	LTF	P02788	710 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	KRT1	P04264	644 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	GLDC	P23378	1020 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	LACTB	P83111	547 aa	Predicted RBP	7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	TMEM177	Q53S58	311 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	PIK3R6	Q5UE93	754 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	ETV3L	Q6ZN32	361 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	PTRH1	Q86Y79	214 aa	Known RBP	7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	FAM126B	Q8IXS8	530 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	SLC38A3	Q99624	504 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	TARS2	Q9BW92	718 aa	Known RBP	7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	RNF38	Q9H0F5	515 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	SRPK3	Q9UPE1	567 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506	TELO2	Q9Y4R8	837 aa		7.6	□□□□□ -1.19
LEMD3-205	ENST00000544506		M0R2C6	588 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	MAN2B1	O00754	1011 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	KCNK3	O14649	394 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	TMEM253	P0C7T8	217 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	MED14OS	P0DP75	135 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	NCAM1	P13591	858 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	FLT3	P36888	993 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	TUSC3	Q13454	348 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	TARBP2	Q15633	366 aa	Known RBP	7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	CDCA2	Q69YH5	1023 aa	Predicted RBP	7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	KCTD1	Q719H9	257 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	PPP1R16B	Q96T49	567 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	DTL	Q9NZJ0	730 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	NUB1	Q9Y5A7	615 aa		7.59	□□□□□ -1.19
LEMD3-205	ENST00000544506	BUB1B	O60566	1050 aa	Predicted RBP	7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	ATF2	P15336	505 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	PFKL	P17858	780 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	IGFBP6	P24592	240 aa	Predicted RBP	7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	GRIN1	Q05586	938 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	CFAP100	Q494V2	611 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	FIGN	Q5HY92	759 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	ATG14	Q6ZNE5	492 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	UBE2R2	Q712K3	238 aa	Predicted RBP	7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	TRIM48	Q8IWZ4	208 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	TTLL11	Q8NHH1	800 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	CLEC4D	Q8WXI8	215 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	CPA5	Q8WXQ8	436 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	DDX1	Q92499	740 aa	Known RBP	7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506	YIPF4	Q9BSR8	244 aa		7.58	□□□□□ -1.2
LEMD3-205	ENST00000544506		A0A087X0B3	334 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	LOC105371045	A0A1W2PR82	267 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	NFIB	O00712	420 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	KPNA6	O60684	536 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	TSPAN15	O95858	294 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	C8B	P07358	591 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	C1QTNF9	P0C862	333 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	MYCLP1	P12525	358 aa	Predicted RBP	7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	POU3F2	P20265	443 aa	Predicted RBP	7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	STAT5A	P42229	794 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	MECP2	P51608	486 aa	Known RBP	7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	EPHA5	P54756	1037 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	CACNB2	Q08289	660 aa	Predicted RBP	7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	FSTL4	Q6MZW2	842 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	HHIPL2	Q6UWX4	724 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	NLGN4X	Q8N0W4	816 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	FAM26E	Q8N5C1	309 aa		7.57	□□□□□ -1.2
LEMD3-205	ENST00000544506	TCAF2	A6NFQ2	919 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	GSG1L2	A8MUP6	293 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	PDE8A	O60658	829 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	NEK4	P51957	841 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	NOSTRIN	Q8IVI9	506 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	PPM1K	Q8N3J5	372 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	C2orf69	Q8N8R5	385 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	CHST14	Q8NCH0	376 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	SMARCC2	Q8TAQ2	1214 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	TOE1	Q96GM8	510 aa	Known RBP	7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	WNK4	Q96J92	1243 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	SIGLEC10	Q96LC7	697 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	MTFR1L	Q9H019	292 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	CD320	Q9NPF0	282 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	FAN1	Q9Y2M0	1017 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	ATP23	Q9Y6H3	246 aa		7.56	□□□□□ -1.2
LEMD3-205	ENST00000544506	CBX4	O00257	560 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	TRAF5	O00463	557 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	TXK	P42681	527 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	LIMS1	P48059	325 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	SSPN	Q14714	243 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	PCBP1	Q15365	356 aa	Known RBP eCLIP	7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	CR1L	Q2VPA4	569 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	PAN2	Q504Q3	1202 aa	Known RBP	7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	TEPP	Q6URK8	271 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	CD300LD	Q6UXZ3	194 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	EP400NL	Q6ZTU2	488 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	B3GNT8	Q7Z7M8	397 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	ZC3H18	Q86VM9	953 aa	Known RBP	7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	THNSL2	Q86YJ6	484 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	TMEFF1	Q8IYR6	380 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	DDX11	Q96FC9	970 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	PDGFD	Q9GZP0	370 aa	Predicted RBP	7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	CABP5	Q9NP86	173 aa		7.55	□□□□□ -1.2
LEMD3-205	ENST00000544506	IRAK3	Q9Y616	596 aa		7.55	□□□□□ -1.2

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