RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 EFCC1Q9HA90 598 aa34.15■■■■□ 3.06
CCM2-219ENST00000544363 BLOC1S4Q9NUP1 217 aa34.15■■■■□ 3.06
CCM2-219ENST00000544363 SOWAHBA6NEL2 793 aa34.15■■■■□ 3.06
CCM2-219ENST00000544363 IGF2BP3O00425 579 aaKnown RBP eCLIP34.15■■■■□ 3.06
CCM2-219ENST00000544363 INHBEP58166 350 aa34.15■■■■□ 3.06
CCM2-219ENST00000544363 B3GNT9Q6UX72 402 aa34.15■■■■□ 3.06
CCM2-219ENST00000544363 HHIPL1Q96JK4 782 aa34.15■■■■□ 3.06
CCM2-219ENST00000544363 EML1O00423 815 aa34.14■■■■□ 3.06
CCM2-219ENST00000544363 MYL1P05976 194 aa34.14■■■■□ 3.06
CCM2-219ENST00000544363 CASP1P29466 404 aa34.14■■■■□ 3.06
CCM2-219ENST00000544363 STXBP2Q15833 593 aa34.14■■■■□ 3.06
CCM2-219ENST00000544363 FAM200AQ8TCP9 573 aa34.14■■■■□ 3.06
CCM2-219ENST00000544363 TBC1D22BQ9NU19 505 aa34.14■■■■□ 3.06
CCM2-219ENST00000544363 MAN1B1Q9UKM7 699 aa34.14■■■■□ 3.06
CCM2-219ENST00000544363 DNAJC25-GNG10A0A024R161 153 aa34.13■■■■□ 3.05
CCM2-219ENST00000544363 DHX15O43143 795 aaKnown RBP34.13■■■■□ 3.05
CCM2-219ENST00000544363 MED24O75448 989 aa34.13■■■■□ 3.05
CCM2-219ENST00000544363 RPA1P27694 616 aa34.13■■■■□ 3.05
CCM2-219ENST00000544363 UNC45AQ9H3U1 944 aa34.13■■■■□ 3.05
CCM2-219ENST00000544363 PKD2L1Q9P0L9 805 aa34.13■■■■□ 3.05
CCM2-219ENST00000544363 ITGB3BPQ13352 177 aaPredicted RBP34.12■■■■□ 3.05
CCM2-219ENST00000544363 CUL4BQ13620 913 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 FAM110CQ1W6H9 321 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 ISM2Q6H9L7 571 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 C11orf57Q6ZUT1 292 aaPredicted RBP34.12■■■■□ 3.05
CCM2-219ENST00000544363 CATSPER3Q86XQ3 398 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 TRIML1Q8N9V2 468 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 LARP4BQ92615 738 aaKnown RBP34.12■■■■□ 3.05
CCM2-219ENST00000544363 RAD54LQ92698 747 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 EIF2AK1Q9BQI3 630 aaKnown RBP34.12■■■■□ 3.05
CCM2-219ENST00000544363 POLR3CQ9BUI4 534 aaPredicted RBP34.12■■■■□ 3.05
CCM2-219ENST00000544363 BLZF1Q9H2G9 400 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 POTEB3A0JP26 581 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 RGS20O76081 388 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 EDNRBP24530 442 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 POTEBQ6S5H4 581 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 GSDMAQ96QA5 445 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 KIAA1024Q9UPX6 916 aa34.12■■■■□ 3.05
CCM2-219ENST00000544363 CHMP2AO43633 222 aa34.11■■■■□ 3.05
CCM2-219ENST00000544363 EIF3JO75822 258 aaKnown RBP34.11■■■■□ 3.05
CCM2-219ENST00000544363 PGK2P07205 417 aa34.11■■■■□ 3.05
CCM2-219ENST00000544363 SPATA31C1P0DKV0 1188 aa34.11■■■■□ 3.05
CCM2-219ENST00000544363 XRCC6P12956 609 aaKnown RBP eCLIP34.11■■■■□ 3.05
CCM2-219ENST00000544363 ZNF165P49910 485 aa34.11■■■■□ 3.05
CCM2-219ENST00000544363 AMPD3Q01432 767 aa34.11■■■■□ 3.05
CCM2-219ENST00000544363 DPCR1Q3MIW9 517 aa34.11■■■■□ 3.05
CCM2-219ENST00000544363 GNPTABQ3T906 1256 aa34.11■■■■□ 3.05
CCM2-219ENST00000544363 SV2BQ7L1I2 683 aa34.11■■■■□ 3.05
CCM2-219ENST00000544363 KCNK18Q7Z418 384 aa34.11■■■■□ 3.05
CCM2-219ENST00000544363 CDHR1Q96JP9 859 aa34.11■■■■□ 3.05
CCM2-219ENST00000544363 B4DLN1 442 aa34.1■■■■□ 3.05
CCM2-219ENST00000544363 DEKP35659 375 aaKnown RBP34.1■■■■□ 3.05
CCM2-219ENST00000544363 FSTL1Q12841 308 aa34.1■■■■□ 3.05
CCM2-219ENST00000544363 SEMA3FQ13275 785 aa34.1■■■■□ 3.05
CCM2-219ENST00000544363 IFNL1Q8IU54 200 aa34.1■■■■□ 3.05
CCM2-219ENST00000544363 ATP9AO75110 1047 aa34.09■■■■□ 3.05
CCM2-219ENST00000544363 MORC3Q14149 939 aa34.09■■■■□ 3.05
CCM2-219ENST00000544363 MCM6Q14566 821 aa34.09■■■■□ 3.05
CCM2-219ENST00000544363 EPHA7Q15375 998 aa34.09■■■■□ 3.05
CCM2-219ENST00000544363 HSD17B14Q9BPX1 270 aa34.09■■■■□ 3.05
CCM2-219ENST00000544363 CBX8Q9HC52 389 aa34.09■■■■□ 3.05
CCM2-219ENST00000544363 TUFT1Q9NNX1 390 aa34.09■■■■□ 3.05
CCM2-219ENST00000544363 DDX39AO00148 427 aaKnown RBP34.08■■■■□ 3.05
CCM2-219ENST00000544363 FGD4Q96M96 766 aa34.08■■■■□ 3.05
CCM2-219ENST00000544363 MPHOSPH6Q99547 160 aaKnown RBP34.08■■■■□ 3.05
CCM2-219ENST00000544363 C7orf25Q9BPX7 421 aa34.08■■■■□ 3.05
CCM2-219ENST00000544363 NAT10Q9H0A0 1025 aaKnown RBP34.08■■■■□ 3.05
CCM2-219ENST00000544363 ADGRA2Q96PE1 1338 aa34.08■■■■□ 3.05
CCM2-219ENST00000544363 PDE4DQ08499 809 aa34.08■■■■□ 3.05
CCM2-219ENST00000544363 SREBF2Q12772 1141 aa34.08■■■■□ 3.05
CCM2-219ENST00000544363 TAF1CQ15572 869 aaPredicted RBP34.08■■■■□ 3.05
CCM2-219ENST00000544363 KCTD17Q8N5Z5 321 aa34.08■■■■□ 3.05
CCM2-219ENST00000544363 ZNFX1Q9P2E3 1918 aaKnown RBP34.08■■■■□ 3.05
CCM2-219ENST00000544363 POTEFA5A3E0 1075 aa34.07■■■■□ 3.04
CCM2-219ENST00000544363 SPATA31C2B4DYI2 1134 aa34.07■■■■□ 3.04
CCM2-219ENST00000544363 STRNO43815 780 aa34.07■■■■□ 3.04
CCM2-219ENST00000544363 UVSSAQ2YD98 709 aa34.07■■■■□ 3.04
CCM2-219ENST00000544363 POTEGQ6S5H5 508 aa34.07■■■■□ 3.04
CCM2-219ENST00000544363 ABRAQ8N0Z2 381 aa34.07■■■■□ 3.04
CCM2-219ENST00000544363 RGL1Q9NZL6 768 aa34.07■■■■□ 3.04
CCM2-219ENST00000544363 BMP6P22004 513 aa34.06■■■■□ 3.04
CCM2-219ENST00000544363 ICAM3P32942 547 aa34.06■■■■□ 3.04
CCM2-219ENST00000544363 DHX8Q14562 1220 aaKnown RBP34.06■■■■□ 3.04
CCM2-219ENST00000544363 MIER3Q7Z3K6 550 aa34.06■■■■□ 3.04
CCM2-219ENST00000544363 TRIM9Q9C026 710 aa34.06■■■■□ 3.04
CCM2-219ENST00000544363 LRRC27Q9C0I9 530 aa34.06■■■■□ 3.04
CCM2-219ENST00000544363 KIAA1217Q5T5P2 1943 aa34.05■■■■□ 3.04
CCM2-219ENST00000544363 E9PMD0 336 aa34.05■■■■□ 3.04
CCM2-219ENST00000544363 SLITRK3O94933 977 aa34.05■■■■□ 3.04
CCM2-219ENST00000544363 RPN1P04843 607 aaKnown RBP34.05■■■■□ 3.04
CCM2-219ENST00000544363 MUTP22033 750 aa34.05■■■■□ 3.04
CCM2-219ENST00000544363 CYP4A11Q02928 519 aa34.05■■■■□ 3.04
CCM2-219ENST00000544363 DYDC2Q96IM9 177 aa34.05■■■■□ 3.04
CCM2-219ENST00000544363 CPA4Q9UI42 421 aa34.05■■■■□ 3.04
CCM2-219ENST00000544363 LOC102724159A0A0B4J2E5 919 aa34.04■■■■□ 3.04
CCM2-219ENST00000544363 KCNA2P16389 499 aa34.04■■■■□ 3.04
CCM2-219ENST00000544363 PWP2Q15269 919 aaKnown RBP34.04■■■■□ 3.04
CCM2-219ENST00000544363 RMND1Q9NWS8 449 aa34.04■■■■□ 3.04
CCM2-219ENST00000544363 DNM3Q9UQ16 869 aa34.04■■■■□ 3.04
CCM2-219ENST00000544363 IVNS1ABPQ9Y6Y0 642 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms