RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 BLOC1S2Q6QNY1 142 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 TEX2Q8IWB9 1127 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 C7orf31Q8N865 590 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 CAGE1Q8TC20 777 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 GPR20Q99678 358 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 USP26Q9BXU7 913 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 RIC8AQ9NPQ8 531 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 PCDHA6Q9UN73 950 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 PCDHA8Q9Y5H6 950 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 UBIAD1Q9Y5Z9 338 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 GBF1Q92538 1859 aa15.06■□□□□ 0
TNFRSF1A-215ENST00000543359 H3BRB1 525 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 REC8O95072 547 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 LGALS2P05162 132 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 PFKMP08237 780 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 GRIN2CQ14957 1233 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 NTRK3Q16288 839 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 PPP1R18Q6NYC8 613 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 DEFB128Q7Z7B8 93 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 AFAP1L1Q8TED9 768 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 BRF1Q92994 677 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 TIFAQ96CG3 184 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 GPRASP2Q96D09 838 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 TUT1Q9H6E5 874 aaKnown RBP15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 PPP4R2Q9NY27 417 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 BARHL2Q9NY43 387 aa15.05■□□□□ -0
TNFRSF1A-215ENST00000543359 ADAMTS3O15072 1205 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 NEFLP07196 543 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 CKBP12277 381 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 CLK2P49760 499 aaKnown RBP15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 METAP2P50579 478 aaKnown RBP eCLIP15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 PKN1Q16512 942 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 ERICH6BQ5W0A0 696 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 NLRX1Q86UT6 975 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 RETREG2Q8NC44 543 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 CYP2W1Q8TAV3 490 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 ZNF576Q9H609 170 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 ZSWIM6Q9HCJ5 1215 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 JADE2Q9NQC1 790 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 NOD1Q9Y239 953 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 YBX2Q9Y2T7 364 aaKnown RBP15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 XIRP2A4UGR9 3374 aa15.04■□□□□ -0
TNFRSF1A-215ENST00000543359 GSTTP1A0A1W2PQM5 241 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 SMCO2A6NFE2 343 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 SPDYE3A6NKU9 549 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 hCG_1984214I3L0E3 225 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 CXCL10P02778 98 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 SELPP16109 830 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 NAPAP54920 295 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 PTK7Q13308 1070 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 MBTPS1Q14703 1052 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 PFKFB3Q16875 520 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 SERINC5Q86VE9 423 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 ZNF713Q8N859 430 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 MYLIPQ8WY64 445 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 RNPEPQ9H4A4 650 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 SLC4A7Q9Y6M7 1214 aa15.03■□□□□ -0
TNFRSF1A-215ENST00000543359 CCDC196A0A1B0GTZ2 297 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 NOP56O00567 594 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 MAFGO15525 162 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 PRPF3O43395 683 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 NBNO60934 754 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 SMIM10L2AP0DMW4 78 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 SMIM10L2BP0DMW5 78 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 PSMA5P28066 241 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 PDIA3P30101 505 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 RABGGTBP53611 331 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 ADAM17P78536 824 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 FGD1P98174 961 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 TOB2Q14106 344 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 TCTN1Q2MV58 587 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 RUFY3Q7L099 469 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 TRIM50Q86XT4 487 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 GIMAP8Q8ND71 665 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 CRYGNQ8WXF5 182 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 CDHR1Q96JP9 859 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 PGBD1Q96JS3 809 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 MTIF3Q9H2K0 278 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 TMEM260Q9NX78 707 aa15.02■□□□□ -0
TNFRSF1A-215ENST00000543359 TTC28Q96AY4 2481 aa15.02□□□□□ -0.01
TNFRSF1A-215ENST00000543359 PTPRSQ13332 1948 aa15.02□□□□□ -0.01
TNFRSF1A-215ENST00000543359 FOSP01100 380 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 SCG2P13521 617 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 MYOGP15173 224 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ADCY7P51828 1080 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 MTMR1Q13613 665 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ZNF618Q5T7W0 954 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 LRRC8DQ7L1W4 858 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 CCDC155Q8N6L0 562 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 SLC17A8Q8NDX2 589 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 MXRA8Q9BRK3 442 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ANO3Q9BYT9 981 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 TM6SF1Q9BZW5 370 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 KCNH7Q9NS40 1196 aa15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 NAP1L2Q9ULW6 460 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1A-215ENST00000543359 MUC3AQ02505 3323 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ESYT2A0FGR8 921 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 C17orf102A2RUQ5 167 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ZBBXA8MT70 800 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 MEIS1O00470 390 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms