RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 GOLPH3Q9H4A6 298 aa26.05■■□□□ 1.76
SHD-201ENST00000543264 DONSONQ9NYP3 566 aa26.05■■□□□ 1.76
SHD-201ENST00000543264 STX8Q9UNK0 236 aa26.05■■□□□ 1.76
SHD-201ENST00000543264 NFS1Q9Y697 457 aa26.05■■□□□ 1.76
SHD-201ENST00000543264 CASZ1Q86V15 1759 aa26.05■■□□□ 1.76
SHD-201ENST00000543264 TRAF5O00463 557 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 ATP2C2O75185 946 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 MYBP10242 640 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 PRDX5P30044 214 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 RPS6KA1Q15418 735 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 ZMYND12Q9H0C1 365 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 NUCKS1Q9H1E3 243 aaKnown RBP26.04■■□□□ 1.76
SHD-201ENST00000543264 ACTR5Q9H9F9 607 aaPredicted RBP26.04■■□□□ 1.76
SHD-201ENST00000543264 MKNK2Q9HBH9 465 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 SLC12A6Q9UHW9 1150 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 TRAPPC3O43617 180 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 ECHS1P30084 290 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 ZNF844Q08AG5 666 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 PREPLQ4J6C6 727 aaPredicted RBP26.04■■□□□ 1.76
SHD-201ENST00000543264 UBLCP1Q8WVY7 318 aaPredicted RBP26.04■■□□□ 1.76
SHD-201ENST00000543264 PNMA5Q96PV4 448 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 AP1M1Q9BXS5 423 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 JAG2Q9Y219 1238 aa26.04■■□□□ 1.76
SHD-201ENST00000543264 CEP104O60308 925 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 NTSR2O95665 410 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 PDHBP11177 359 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 MMP14P50281 582 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 FAM133AQ8N9E0 248 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 LRRC45Q96CN5 670 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 TMEM59LQ9UK28 342 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 CEP83Q9Y592 693 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 COL4A3BPQ9Y5P4 624 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 COL4A1P02462 1669 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 KLHL30Q0D2K2 578 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 PARP10Q53GL7 1025 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 ANKS1AQ92625 1134 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 SYN2Q92777 582 aaPredicted RBP26.03■■□□□ 1.76
SHD-201ENST00000543264 SEC16BQ96JE7 1060 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 NEUROG2Q9H2A3 272 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 HAUS2Q9NVX0 235 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 BIN2Q9UBW5 565 aaPredicted RBP26.03■■□□□ 1.76
SHD-201ENST00000543264 MCM8Q9UJA3 840 aa26.03■■□□□ 1.76
SHD-201ENST00000543264 COL22A1Q8NFW1 1626 aaPredicted RBP26.03■■□□□ 1.76
SHD-201ENST00000543264 KLRF2D3W0D1 207 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 KLRK1P26718 216 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 SNCBQ16143 134 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 PARP9Q8IXQ6 854 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 DDX12PQ92771 950 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 CNOT8Q9UFF9 292 aaKnown RBP26.02■■□□□ 1.76
SHD-201ENST00000543264 NOVA2Q9UNW9 492 aaKnown RBP26.02■■□□□ 1.76
SHD-201ENST00000543264 RREB1Q92766 1687 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 PSEN1P49768 467 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 CYB5D1Q6P9G0 228 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 FUKQ8N0W3 1084 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 VAT1LQ9HCJ6 419 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 C6orf50Q9HD87 102 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 LEMD3Q9Y2U8 911 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 ITGB4P16144 1822 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 TSPY3P0CV98 308 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 TSPY8P0CW00 308 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 NF2P35240 595 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 FLT3P36888 993 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 CUL1Q13616 776 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 RUFY4Q6ZNE9 571 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 FBXL5Q9UKA1 691 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 ODF2LQ9ULJ1 636 aa26.02■■□□□ 1.76
SHD-201ENST00000543264 BCL9O00512 1426 aa26.01■■□□□ 1.75
SHD-201ENST00000543264 ANKRD20A8PQ5CZ79 823 aa26.01■■□□□ 1.75
SHD-201ENST00000543264 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.01■■□□□ 1.75
SHD-201ENST00000543264 RIC8AQ9NPQ8 531 aa26.01■■□□□ 1.75
SHD-201ENST00000543264 STK17AQ9UEE5 414 aa26.01■■□□□ 1.75
SHD-201ENST00000543264 PPP2R2AP63151 447 aa26.01■■□□□ 1.75
SHD-201ENST00000543264 FKBP3Q00688 224 aaKnown RBP26.01■■□□□ 1.75
SHD-201ENST00000543264 DNAAF5Q86Y56 855 aa26.01■■□□□ 1.75
SHD-201ENST00000543264 RAPGEF5Q92565 580 aa26.01■■□□□ 1.75
SHD-201ENST00000543264 SCLT1Q96NL6 688 aa26.01■■□□□ 1.75
SHD-201ENST00000543264 MINPP1Q9UNW1 487 aa26.01■■□□□ 1.75
SHD-201ENST00000543264 A0A0G2JS52 829 aa26■■□□□ 1.75
SHD-201ENST00000543264 PALM3A6NDB9 673 aaPredicted RBP26■■□□□ 1.75
SHD-201ENST00000543264 ELF1P32519 619 aa26■■□□□ 1.75
SHD-201ENST00000543264 BIRC3Q13489 604 aa26■■□□□ 1.75
SHD-201ENST00000543264 MYOCDQ8IZQ8 938 aa26■■□□□ 1.75
SHD-201ENST00000543264 SCFD2Q8WU76 684 aa26■■□□□ 1.75
SHD-201ENST00000543264 N4BP2L2Q92802 583 aaPredicted RBP26■■□□□ 1.75
SHD-201ENST00000543264 NUDT12Q9BQG2 462 aa26■■□□□ 1.75
SHD-201ENST00000543264 TMEM47Q9BQJ4 181 aa26■■□□□ 1.75
SHD-201ENST00000543264 DDX47Q9H0S4 455 aaKnown RBP26■■□□□ 1.75
SHD-201ENST00000543264 TFCP2L1Q9NZI6 479 aa26■■□□□ 1.75
SHD-201ENST00000543264 POTEMA6NI47 508 aa26■■□□□ 1.75
SHD-201ENST00000543264 SART1O43290 800 aaKnown RBP26■■□□□ 1.75
SHD-201ENST00000543264 KIF4AO95239 1232 aa26■■□□□ 1.75
SHD-201ENST00000543264 CHRM1P11229 460 aaPredicted RBP26■■□□□ 1.75
SHD-201ENST00000543264 GNA11P29992 359 aa26■■□□□ 1.75
SHD-201ENST00000543264 CALCRLQ16602 461 aa26■■□□□ 1.75
SHD-201ENST00000543264 SOGA3Q5TF21 947 aa26■■□□□ 1.75
SHD-201ENST00000543264 CACNA2D3Q8IZS8 1091 aa26■■□□□ 1.75
SHD-201ENST00000543264 TACO1Q9BSH4 297 aaKnown RBP26■■□□□ 1.75
SHD-201ENST00000543264 TMEM260Q9NX78 707 aa26■■□□□ 1.75
SHD-201ENST00000543264 DCDC2CA8MYV0 355 aa25.99■■□□□ 1.75
SHD-201ENST00000543264 C12orf60Q5U649 245 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms