RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 AKNAD1Q5T1N1 836 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 TMEM179Q6ZVK1 233 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 PRPF38AQ8NAV1 312 aaKnown RBP5.96□□□□□ -1.45
CLIP1-217ENST00000543205 ZIC5Q96T25 663 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 FAM126AQ9BYI3 521 aaPredicted RBP5.96□□□□□ -1.45
CLIP1-217ENST00000543205 INCENPQ9NQS7 918 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 TYW1Q9NV66 732 aaKnown RBP5.96□□□□□ -1.45
CLIP1-217ENST00000543205 SNTG2Q9NY99 539 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.96□□□□□ -1.45
CLIP1-217ENST00000543205 SFMBT1Q9UHJ3 866 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 LRFN2Q9ULH4 789 aa5.96□□□□□ -1.45
CLIP1-217ENST00000543205 GPC6Q9Y625 555 aaPredicted RBP5.96□□□□□ -1.45
CLIP1-217ENST00000543205 DDX60LQ5H9U9 1706 aaKnown RBP5.96□□□□□ -1.46
CLIP1-217ENST00000543205 BAZ2AQ9UIF9 1905 aaKnown RBP5.96□□□□□ -1.46
CLIP1-217ENST00000543205 A0A1W2PNR3 127 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 MANSC4A6NHS7 340 aaPredicted RBP5.96□□□□□ -1.46
CLIP1-217ENST00000543205 TRIM75PA6NK02 468 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 TSPY2A6NKD2 308 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 NDUFB5O43674 189 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 ORC4O43929 436 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 CETPP11597 493 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 MZF1P28698 734 aaPredicted RBP5.96□□□□□ -1.46
CLIP1-217ENST00000543205 MAP2K2P36507 400 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 JAG1P78504 1218 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 TFAP4Q01664 338 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 KIF23Q02241 960 aaPredicted RBP5.96□□□□□ -1.46
CLIP1-217ENST00000543205 SREBF2Q12772 1141 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 TRDNQ13061 729 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 PAK2Q13177 524 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 SNAPC2Q13487 334 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 SEPT2Q15019 361 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 HIF1AQ16665 826 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 SHROOM1Q2M3G4 852 aaPredicted RBP5.96□□□□□ -1.46
CLIP1-217ENST00000543205 C11orf91Q3C1V1 193 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 FAM47AQ5JRC9 791 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 SYCP2LQ5T4T6 812 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 CCDC84Q86UT8 332 aaPredicted RBP5.96□□□□□ -1.46
CLIP1-217ENST00000543205 TBC1D10CQ8IV04 446 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 ZNF280CQ8ND82 737 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 SH3TC2Q8TF17 1288 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 ESR2Q92731 530 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 HSH2DQ96JZ2 352 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 SCYL1Q96KG9 808 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 FRMD6Q96NE9 622 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 KRT23Q9C075 422 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.96□□□□□ -1.46
CLIP1-217ENST00000543205 AFG3L2Q9Y4W6 797 aa5.96□□□□□ -1.46
CLIP1-217ENST00000543205 CXCL11O14625 94 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 CYP21A2P08686 494 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 ZKSCAN1P17029 563 aaPredicted RBP5.95□□□□□ -1.46
CLIP1-217ENST00000543205 GUCY1A2P33402 732 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 NT5C2P49902 561 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 INHBEP58166 350 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 ATP2B2Q01814 1243 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 ICA1Q05084 483 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 SPP2Q13103 211 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 EFHC2Q5JST6 749 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 LRRC69Q6ZNQ3 347 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 CRELD1Q96HD1 420 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 FEZ1Q99689 392 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 WDR18Q9BV38 432 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 CFHR5Q9BXR6 569 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 CRISPLD1Q9H336 500 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 CNNM2Q9H8M5 875 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 FBXO9Q9UK97 447 aaPredicted RBP5.95□□□□□ -1.46
CLIP1-217ENST00000543205 SIPA1L1O43166 1804 aa5.95□□□□□ -1.46
CLIP1-217ENST00000543205 CCL15-CCL14A0A0B4J2E2 113 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 C19orf81C9J6K1 198 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 SLC27A2O14975 620 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 MCCP23508 829 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 CDKN1CP49918 316 aaPredicted RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 MAP2K1Q02750 393 aaPredicted RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 NECTIN1Q15223 517 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 CCL15Q16663 113 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 CREB3L3Q68CJ9 461 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 OTUD7BQ6GQQ9 843 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 GADL1Q6ZQY3 521 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 FASTKD5Q7L8L6 764 aaKnown RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 RALYLQ86SE5 291 aaKnown RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 JAMLQ86YT9 394 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 NEDD1Q8NHV4 660 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 SUSD3Q96L08 255 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 NUCKS1Q9H1E3 243 aaKnown RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 SH2D4AQ9H788 454 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 TMOD4Q9NZQ9 345 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 KCNH4Q9UQ05 1017 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 TACC3Q9Y6A5 838 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 NEDD4P46934 1319 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 OTOFQ9HC10 1997 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 LAMB1P07942 1786 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 A0A0G2JLL6 359 aaPredicted RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 ESYT3A0FGR9 886 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 B4E1Z4 1266 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 E7EWF7 191 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 EPB41L2O43491 1005 aaKnown RBP5.94□□□□□ -1.46
CLIP1-217ENST00000543205 FZD6O60353 706 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 PPFIA3O75145 1194 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 FAM13AO94988 1023 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 TTLL1O95922 423 aa5.94□□□□□ -1.46
CLIP1-217ENST00000543205 HSPA8P11142 646 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms